| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0215 |
|---|
| Symbol | nagB |
|---|
| ID | 3241180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 225758 |
|---|
| End bp | 226489 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637166884 |
|---|
| Product | glucosamine-6-phosphate isomerase |
|---|
| Protein accession | YP_187811 |
|---|
| Protein GI | 57866141 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | [TIGR00502] glucosamine-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATGA TTAATTTAGA TTCAAAAAAA CTTGCGTCAT TTTATGTAGC ATGCGAGTTG
TTTAAACAGA TACAGCAGTA CCCTCATACC AAACTCGGTT TAGCAACTGG TGGAACTATG
ACTGACGTAT ATCATTACTT AGTAAATTTA TTAACCAAAA ATAAAGCTGA TGTGTCGCAG
GTTGAAACAT TTAATTTAGA TGAATATGTA GGTTTAAAAG CAAGTCATCA GCAAAGTTAC
CATACCTATA TGAATAAAGT GCTATTTGAG CAATATCCTC ATTTTGCTAA AAATCACATT
CATATTCCTG ATGGCTATTC AGAAAATCTA GAAGCAGAAG CGGAACGATA TAACAAATTA
TTAGATGAAA GAGGTCCGAT TGATATTCAA ATTTTAGGAA TTGGAGAAAA TGGTCACATT
GGATTTAATG AACCAGGAAC AGACTTCAAT AGTGAAACAC ATGTGGTGAA CTTAACAGAA
AGCACTATAA AAGCAAATAG TCGATATTTT GACAATGAAG CGGATGTTCC TAGACAAGCA
GTTTCAATGG GATTAGCAAG TATTTTAAAA GCTAAAAGGA TTATACTACT TGCATTTGGT
CCAAAGAAAA AAGAGGCCAT AAGTAAACTG TTAAATGAAC AGGTTACCGA AGATGTACCT
GCGACCATTT TACACACACA TCCTAATGTT GAAGTTTATG TAGATGATGA TGCAGCACCA
GATTGTTTAT AA
|
|---|
| Protein sequence | MKMINLDSKK LASFYVACEL FKQIQQYPHT KLGLATGGTM TDVYHYLVNL LTKNKADVSQ
VETFNLDEYV GLKASHQQSY HTYMNKVLFE QYPHFAKNHI HIPDGYSENL EAEAERYNKL
LDERGPIDIQ ILGIGENGHI GFNEPGTDFN SETHVVNLTE STIKANSRYF DNEADVPRQA
VSMGLASILK AKRIILLAFG PKKKEAISKL LNEQVTEDVP ATILHTHPNV EVYVDDDAAP
DCL
|
|---|
| |