Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0063 |
Symbol | |
ID | 3241649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 50679 |
End bp | 52067 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637166714 |
Product | sodium:dicarboxylate symporter family protein |
Protein accession | YP_187661 |
Protein GI | 57866016 |
COG category | [R] General function prediction only |
COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00246087 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAC TTTTTACAGT AATTAATGTC ATCGTGTTAC TTGTTTTCCT AATAATGTTA AATATTATGG CAAGAAAACA CGTCTCATTC CCTAAACGTG TCTTTACCGC TTTAGCAATA GGTATCGTAT TTGGCATTGT ATTACACCTC ATATATGGTG CAGAGTCTAA AACTCTCGAA CAATCAACAG ACTGGTTTAG TATTGTTGGA GATGGTTATG TTGCACTATT ACAAATGATT GTCATGCCAC TAATATTCAT TTCAATTGTT GCCGCTTTTA GCAAAATACA AATTGGTGAA AAATTCGCTA AGATCGGTTC TTATATTTTT ATGTTTTTAA TTGGTACTGT AGCCATTGCA GCTATCGTTG GAATTTTTTA CGCTTTGATC TTTGGTTTAG ATGCATCGTC TATTGATTTA GGTAGTGCAG AACATTCACG TGGTACAGAA ATTTCAAAAC AAGCCAAAGA TTTAACTGCA AACACTTTAC CACAACAAAT TCTCGAAGTA TTCCCAAGCA ATCCATTTTT AGATTTCACA GGACAACGTA CAACTTCGAC AATTGCAGTT GTTATTTTTG CAACGTTTGT GGGCTTTGCT TATCTTAGAG TTGCAAGAAA ACAGCCGGAA CATGGAAGCT TACTTAAACG TGGTATAGAA GCAATCTATT CTATCGTTAT GGCTATCGTA ACTTTTGTTT TACGATTAAC GCCTTATGGC ATTTTAGCTA TTATGGCTTC TACTCTTGCG ACAAGTGATT TTTCTGCAAT TTGGACGTTA GGTAAATTCT TAATTGCTTC ATACGCAGCT CTAATCACAA TGTATATTAT CCATTTAATT ATACTGAGTG TCTTAGGTAT CAATCCCGTT AAATACGTGA AAAAGACAAT AGAAGTACTA ATCTTTGCAT TTACTTCACG TTCAAGTGCA GGTGCATTAC CGTTAAATGT TCAAACGCAA ACAAAACGTT TAGGTGTACC TGAGGGAATT GCAAACTTCT CTGCAACTTT TGGTTTATCC ATAGGGCAAA ATGGCTGTGC AGGAATCTAT CCTGCTATGC TAGCAGTTAT GGTGGCACCA GTAGCAAATG TAGAAATTGA CTTCCAATTT GTTGTTACAC TTATTGCTGT TGTTATTATA AGTTCATTTG GCGTTGCAGG TGTAGGTGGC GGGGCAACAT TCGCATCAAT ACTCGTATTA TCTACACTTA ATCTACCAGT TGCTCTCGCA GGGGTACTGA TATCTATCGA ACCTCTCATC GATATGGGTC GTACAGCACT TAACGTTAAT GACTCAATGC TAGCTGGAAC AGGTACCGCA CGCTTAACGA ATCATTGGGA CAAAAAAACA TTTGACTCAA ATGATTACGG CGATTTATCT GCAAATTAA
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Protein sequence | MEILFTVINV IVLLVFLIML NIMARKHVSF PKRVFTALAI GIVFGIVLHL IYGAESKTLE QSTDWFSIVG DGYVALLQMI VMPLIFISIV AAFSKIQIGE KFAKIGSYIF MFLIGTVAIA AIVGIFYALI FGLDASSIDL GSAEHSRGTE ISKQAKDLTA NTLPQQILEV FPSNPFLDFT GQRTTSTIAV VIFATFVGFA YLRVARKQPE HGSLLKRGIE AIYSIVMAIV TFVLRLTPYG ILAIMASTLA TSDFSAIWTL GKFLIASYAA LITMYIIHLI ILSVLGINPV KYVKKTIEVL IFAFTSRSSA GALPLNVQTQ TKRLGVPEGI ANFSATFGLS IGQNGCAGIY PAMLAVMVAP VANVEIDFQF VVTLIAVVII SSFGVAGVGG GATFASILVL STLNLPVALA GVLISIEPLI DMGRTALNVN DSMLAGTGTA RLTNHWDKKT FDSNDYGDLS AN
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