Gene TDE2753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2753 
Symbol 
ID2740720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2809648 
End bp2810739 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content40% 
IMG OID637161651 
ProductLysM/M23/M37 peptidase 
Protein accessionNP_973351 
Protein GI42528253 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCA TAACTTATTC GGATGCAGTG CATCATAACA ATAGATCGTA TCATAGCAAT 
AGATATAGAA AGCCGAATAC CGTAAAAAAG AGCAGACTTA GCTCTAGGGA TGAATCTTTG 
ATTGTTTTCG GGCTCTTAGC TATGCTCACG GCAGGATTCC TATTTTTTTA TTTCCCGATT 
TTAAAGCTTA ATTGGGGGCT TTCATCAATA AGGTCTATAT CATTTTGGGA AGAGCCTTCA 
TCTATAAATG CAATGCGCCA ATATACCATG CCTTCTTCCG AGATTGTAAA AGAAGATGGT 
CTTCCTTATT CGGAAACTGC AGAAGGCTCC TCTTTTTCCC CTGCTGATGT GCCCGATTTT 
ATTACTGCCG TCGATTTTGA AGAATATATG GTTTCAAAGG GAGATACGGT AAGCGGTATT 
ATTCAAAAAT TCGGTCTTAA AAATTTAGGG ACACTTCTTT CAGTAAACGG AATAAGCAGC 
GCAAAGAAGT TAAGGATAGG CCAAAAGCTG ATTATTCCTT CGATTGACGG GCTTATTTAT 
ACGGCCGTAA AGGGCGATTC CTTGAGCTCT ATTGCCGGTA AATTTAACCT GTCTATCAAT 
GCAATCTTGG ATGCAAATGA CCTTGAGAAT CAGACGGTAA GCATAGGACA AAAGCTTTTT 
ATTCCGGGGG CAACGATGAG CTCCTTTGAG CTTAAAAAGG CCTTGGGGGA GCTTTTTATT 
TATCCTGTGA TTGGAAGGCT TACTTCGCCG TTTGGTTACA GAAGAGATCC TTTTACCGGA 
AGGAAGAGTT TTCACACAGG TATCGATATT GCTTCTCCTA TAGGAACTCC TATTAAGCTG 
ACCCTCGACG GTACGGTTTC TTATACAGGT TATTCTGCCG TTTATGGTAA TTATGTTATA 
GTTACTCATT CGGGCGGTTA TCAGTCAATG TATGGGCATA TGAATTCGAT AAAGGTAAGG 
AGAGGCCAAA TTCTAAATCA GGGCGGTATT ATTGGAACTG TAGGAAATAC GGGAAGATCT 
ACGGGCCCCC ATGTTCATTT TTCCGTATAT AAAGACGGAA AACTCATTAA TCCATTAACC 
GTATTAAAAT AA
 
Protein sequence
MDIITYSDAV HHNNRSYHSN RYRKPNTVKK SRLSSRDESL IVFGLLAMLT AGFLFFYFPI 
LKLNWGLSSI RSISFWEEPS SINAMRQYTM PSSEIVKEDG LPYSETAEGS SFSPADVPDF 
ITAVDFEEYM VSKGDTVSGI IQKFGLKNLG TLLSVNGISS AKKLRIGQKL IIPSIDGLIY 
TAVKGDSLSS IAGKFNLSIN AILDANDLEN QTVSIGQKLF IPGATMSSFE LKKALGELFI 
YPVIGRLTSP FGYRRDPFTG RKSFHTGIDI ASPIGTPIKL TLDGTVSYTG YSAVYGNYVI 
VTHSGGYQSM YGHMNSIKVR RGQILNQGGI IGTVGNTGRS TGPHVHFSVY KDGKLINPLT 
VLK