Gene TDE2726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2726 
Symbol 
ID2740945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2783291 
End bp2784259 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content39% 
IMG OID637161623 
Productcyclic nucleotide binding/GGDEF domain-containing protein 
Protein accessionNP_973324 
Protein GI42528226 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.241979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGTG ATGGACAGAA GATAAAGGCT TTAAGTAATA CTCCTCTTTT TGCAGGATGG 
GATGAGGTTT ACTTAAAAGA CATAGCCGAT ATGGTAGGAA TAGACAGCTA TCAAAAAGGC 
GATATTATTT TTAAGCAGGA TACACGCGGT GACCGATTTT ACATTATTGT AGAAGGAAAT 
GTTATAATTT TATCCCCTGA AGATAATTCC GTTCTGGCCG AATTTGTAAG CGGTGAAATG 
TTCGGTGAGA CAGCTATGCT TACTCAGGAA GAACAAAAAG CCATAGCTTC TGCCAATGAA 
AACTCTATCA TCCTCTCTTT CCCTAAAGAC GGAATTCCCA TGGAAGAGGT TTTTAAGGAT 
AATCCCGTAA CTTATGCTCA ACTGCTAAAA TCGTTTTTGG TCATGGTTTC TCGTAGGACT 
CGAAAGGCTA ACTCTTTAAT AAAAGAAAAC TCTCCCATTA TGCAGGAACT GCAAAAACAG 
GTTTATGGAG ATAAGCTTAC GGGACTTTTA AATAAGGCCT ATCTTGAAGA AAATATTGCG 
GACTTTATGA AAGGCTCTTT TTCTCTTATT ATGATGAAGC CCGATAATTT TAAGGCTATT 
AACGACACCT ACGGTCACGA AAAGGGAGAT GCCTGTCTTA CCTTTATAGG CAATCACTTG 
AGCCATTTTT TAGATACGGA TTCCGTTTTA ATCCGTTATC AGGGAAACGA ATTTGCCGTT 
TTAACGCCTG ATCAGGGTAG GGATGGGGCT GCAAGTTTAG CGGAAAAGAT AAAGGCTGCG 
CTTGAAAACT TAGATATTTC TCCGGTAGTA AACAGTCCTT TTAAGTTGAG TATGAGTTTA 
GGCGTTTTAT TATATCCCGA TACGAAGATT GAAAAAACGG AATTTATAAA ACAATGCTCC 
GAAATGCCCC TTATCGGACG AGCCCGCGGA GGCTCCCAAA TTCTCTTTGA GGAGGATATA 
AATGAATAG
 
Protein sequence
MISDGQKIKA LSNTPLFAGW DEVYLKDIAD MVGIDSYQKG DIIFKQDTRG DRFYIIVEGN 
VIILSPEDNS VLAEFVSGEM FGETAMLTQE EQKAIASANE NSIILSFPKD GIPMEEVFKD 
NPVTYAQLLK SFLVMVSRRT RKANSLIKEN SPIMQELQKQ VYGDKLTGLL NKAYLEENIA 
DFMKGSFSLI MMKPDNFKAI NDTYGHEKGD ACLTFIGNHL SHFLDTDSVL IRYQGNEFAV 
LTPDQGRDGA ASLAEKIKAA LENLDISPVV NSPFKLSMSL GVLLYPDTKI EKTEFIKQCS 
EMPLIGRARG GSQILFEEDI NE