Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2720 |
Symbol | |
ID | 2740939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2777086 |
End bp | 2777922 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637161617 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | NP_973318 |
Protein GI | 42528220 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTG TTTTGTTTTC AGATGATGAT TGTGCAGCTC CCGATTGTAT AAACGATGGC TGTGTTTTTT ATAAACACGA TAAAAGCATA AACAACTGCT TTGTCTTTTA CAAAAATGAT GAACGCTATC TTCACATAAA AAAGATTCTG AACTTAAAAG AAGGCGATGT TTTTAAGGCC GGAATCATAA ACGGAAAAAT AGGCGAAGCT CAGATCTCTC ACCTTTCAGA AGAAAAAATC GTTTTTTCTT TTTGCCCGAA TCCGCCCGAT AAAGGCATTG CTGATAATGG TGCAGATAAA GTTGAGACGA GACCTCTGCC CCTTCCGCCC ATAAAAATAA TTCTGGGCTT TCCCCGCCCC ATTCAGTTGA GGCGTATCCT TCGGGATGCG GCAAGTTTGG GCTTTGCCGA AATCGTACTA TGCGGTACCG ACTTGGGAGA GCGTTCCTAT TTAAAATCGA ACCTTTCAAG CCCCGAAGAA ATAAAAAAAT ATCTTTTAGA CGGTATCTCG CAAGCCGGCC AGACCATGCT ACCGGCCTTT TCTTTTTGCA ATTCGGTAAA AGAAGCCTTA AAAGATTTAA AGGCCGCCTC GTTCAAAGGC AGTAAGGTGC TCCTCGACAT AGGAGATTTT CCTTCTCTTT CAACATTTAG AATGACAAAG GGTGAAAGTG TTCTTATCAC AATTGGAAGC GAAAGAGGTT GGACTCAAAA TGAAAGGGAT GTCTTTTTTT CCGAAGGCTT TATTCCTTAT TCTATGGGAA AACGCATTTT ACGAACCGAA ACCGCCCTTA CTTCTGCCCT GTCCGTTCTC CTTGCAAACA ACGGTTTTTG GGAATAG
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Protein sequence | MNIVLFSDDD CAAPDCINDG CVFYKHDKSI NNCFVFYKND ERYLHIKKIL NLKEGDVFKA GIINGKIGEA QISHLSEEKI VFSFCPNPPD KGIADNGADK VETRPLPLPP IKIILGFPRP IQLRRILRDA ASLGFAEIVL CGTDLGERSY LKSNLSSPEE IKKYLLDGIS QAGQTMLPAF SFCNSVKEAL KDLKAASFKG SKVLLDIGDF PSLSTFRMTK GESVLITIGS ERGWTQNERD VFFSEGFIPY SMGKRILRTE TALTSALSVL LANNGFWE
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