Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2716 |
Symbol | |
ID | 2740935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2773335 |
End bp | 2773991 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637161613 |
Product | HAD family hydrolase |
Protein accession | NP_973314 |
Protein GI | 42528216 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000772309 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG CATGTATTTT TGATTTGGAC GGGACCTTAA CCAACTCCCT TTATTCGATA GCTCATTTTT TAAATGCTGA AACAGCAAAA TACGGTATAC CGCCTGTAGA TGCGGAAGAA TTTAAAATCT TAACAGGCAA CGGTGCGAGA AAACTTGTAC AAAGAGTTCT TGAACGTGCA GGAAAAAACG ATAAAGATTT GGAAGAAAAA ATTCTTACAG AATATAATGC CGCCTATGAT GCCGATCCCG TTTATCTATG CGAGGCCTAT CCGGGAATTA AAAAGCTTTT AGCGGATTTA ATAAAAAACG GAATTTCCGT AAATGTGCTT TCAAACAAGC CTCATCCCAC AACAGAAAAG GTTGTTAAGA CAATCTTCGG CGAGAACACT TTTTCATGTA TCTTAGGAGC CCGGGATTCG GTGGCCTTAA AACCTGACCC TGCAGGTGTC TACGAAATTT TAAAAATGCT CAAGCTCGAA AAAAAAGACT TTCTTTACAT AGGAGACACG GCAACGGATG TTCAAACCGG AAAAAATGCA GGCCTTTTTA CAATCGGTGT TTTATGGGGT TTTAGAAAAC GCCCTGAATT GGAACAAGCC GGAGCTGATG CAATAATCTC AAGCCCTGAA GAAATCCTAA AGATAGCCTT AGGCTAA
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Protein sequence | MKKACIFDLD GTLTNSLYSI AHFLNAETAK YGIPPVDAEE FKILTGNGAR KLVQRVLERA GKNDKDLEEK ILTEYNAAYD ADPVYLCEAY PGIKKLLADL IKNGISVNVL SNKPHPTTEK VVKTIFGENT FSCILGARDS VALKPDPAGV YEILKMLKLE KKDFLYIGDT ATDVQTGKNA GLFTIGVLWG FRKRPELEQA GADAIISSPE EILKIALG
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