| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2623 |
|---|
| Symbol | |
|---|
| ID | 2740797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2663674 |
|---|
| End bp | 2664414 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637161519 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_973221 |
|---|
| Protein GI | 42528123 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAGCAT ACTCATCCGC ACTATCGCAA GAAAAAAGGC GCGGCTTTCT TGATCCTCGC
ACAAAGCTTG CGCTCGTGCT TGTTTTAGCG GTATTTGTTA TGGGCGGACT TGGCGGCTCT
CAAATGAAAT CGATTAAGAT AATCTTGTCG GTTCTTCCGT TTTTATTGCT GCTCATAGAG
CGGCAGTGGA AACGGTTTGG ACGCGGGGTT ATTATGCTTG CGGTCGGTTA TGGGCTGCTG
ATCGCTATGC CGCATTTGCC GGGACTGCTG AATTTCATTG CTTTAATGTG CGGAGGAATT
TTAACGCGCT TTGCAGTTAC GGTAGTTATG GGCGGATATT TGATTGGAAC AACATCCGTT
AGTGAATTTA TCTCCGCTAT GGAGCGGCTT CATATTCCTC AAGCAATCAC CATTCCCATG
TCGGTGATGT TCAGGATGTT TCCGACCATT GGAGCGGAAT GGAAATCCAT CAGACGAGCG
ATGGGTATGC GAGGAATCCG GTTAGGCGGT GTAAGACCCG GAGAGGTTGT GGAGTACCAA
CTGGTTCCTA TGATAACTTC AACCGTCCGT ATCGGAGAAG ACCTGTCTGC CGCTGCGTTG
ACACGCGGAT TGGGCTCTCC GATAAAGCGT ACTAACATCT GCCGTATCGG ATTTCGAGTG
CAGGATTTGA TATTGCTGAT TATCTGCCTC GCCGTTGTTG TCATGTGGAT TTTGGAGCTT
TGCAGAGTAG CGTTATGGTA G
|
|---|
| Protein sequence | MIAYSSALSQ EKRRGFLDPR TKLALVLVLA VFVMGGLGGS QMKSIKIILS VLPFLLLLIE
RQWKRFGRGV IMLAVGYGLL IAMPHLPGLL NFIALMCGGI LTRFAVTVVM GGYLIGTTSV
SEFISAMERL HIPQAITIPM SVMFRMFPTI GAEWKSIRRA MGMRGIRLGG VRPGEVVEYQ
LVPMITSTVR IGEDLSAAAL TRGLGSPIKR TNICRIGFRV QDLILLIICL AVVVMWILEL
CRVALW
|
|---|
| |