Gene TDE2615 details

Gene Information

• Locus tag: TDE2615
• Symbol: lspA
• ID: 2740789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2657236
• End bp: 2657757
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637161511
• Product: signal peptidase II
• Protein accession: NP_973213
• Protein GI: 42528115
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACAATA AAAAAGATTA TTATCTTCCT TTTTTGCTTA CTGCAATAGT TATTGTTGTA 
GACCAAGTTA CTAAAATTTT GGTTGTACAA TATATGTCCG TGAATGAGGT AATTCCGGTG 
ATAGGAGACC TTGTAAATTT GAGGTTTGTA TACAATACCG GCGCGGCCTT TAGTCTTGGA 
GCCGGTTTTG GAGAAATTGC AAGAAAGATA TTGTTGGTTT TTTTACCGTT TTTACTCTTG 
ATAGCTCTTA CCGGAGCATA TCTAAAGTCT GCTGAATTGA CAAGGGCTCA AAGATGGTTT 
ATATGCGGAA TACTGGGCGG AGGCTTTGGA AACCTTATAG ACCGTTTTTT TAGATCTGAA 
GGTGTTGTGG ATTTTATCGA TGTAAAATTT TTCGGCATTT TGGGAATGGA GCGCTGGCCG 
ACCTTTAACG CTGCCGATTC CTTTATCGTT TGCTGCGGAA TAGGGCTTGG TGTAAATTTA 
ATTTTACAGG GTATCAAACA AAAAAAACTT AAAGACAGCT AA 

 

Protein sequence

MNNKKDYYLP FLLTAIVIVV DQVTKILVVQ YMSVNEVIPV IGDLVNLRFV YNTGAAFSLG 
AGFGEIARKI LLVFLPFLLL IALTGAYLKS AELTRAQRWF ICGILGGGFG NLIDRFFRSE 
GVVDFIDVKF FGILGMERWP TFNAADSFIV CCGIGLGVNL ILQGIKQKKL KDS