Gene TDE2597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2597 
Symbolrpe 
ID2741301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2632126 
End bp2632755 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content42% 
IMG OID637161493 
Productribulose-phosphate 3-epimerase 
Protein accessionNP_973195 
Protein GI42528097 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.943131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGGT GTTTTAAATT AAGTCCTTCG CTTTTAAGTG CGGATTTTTC AAAATTAGGT 
GAAGAATTGG CCTTTATAGA GAAGCACGGC GGCGATTGGG TTCACATAGA TGTTATGGAC 
GGGCAGTTTG TGCCTAATTT AACCTTTGGA GCTCCGGTAG TAAAATCTAT ACGCCCCTGT 
TCCAAGCTTG TTTTTGATGT GCATCTAATG GTTAATAATC CCGAAAATTT AGTCTCGGCC 
TTTGCAGATG CAGGTGCGGA TTATTTTACC TTTCATGCTG AAGCATCTAT TCATGCAGAC 
AGACTTATTG CCGATATCCG TTCTCACGGG ATGAAGGCCG GAGTAAGCAT CGTACCGAGC 
ACGCCCGTCG GAATACTTGA AGAAATAGCT CCCCTGGCCG ATCTTATCTT GGTTATGAGT 
GTTAATCCCG GATTCGGAGG ACAAAAGCTT ATACCTTATT GTTTAGAAAA AGTTAAGCGG 
CTAAGGTCAT TACGCGAAGA AAAAAACTAT AATTATTTAA TTTCTGTCGA TGGCGGGATC 
GATTCAAAAA ATGTGGGGTC GGTTATTGAT GCCGGTGCCG ACGTAATTGT GTCCGGTTCA 
GCTTTCTTTT CGGGAGATTT AAGAATATGA
 
Protein sequence
MDRCFKLSPS LLSADFSKLG EELAFIEKHG GDWVHIDVMD GQFVPNLTFG APVVKSIRPC 
SKLVFDVHLM VNNPENLVSA FADAGADYFT FHAEASIHAD RLIADIRSHG MKAGVSIVPS 
TPVGILEEIA PLADLILVMS VNPGFGGQKL IPYCLEKVKR LRSLREEKNY NYLISVDGGI 
DSKNVGSVID AGADVIVSGS AFFSGDLRI