| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2509 |
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| Symbol | |
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| ID | 2739021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2533328 |
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| End bp | 2534212 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 637161401 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | NP_973107 |
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| Protein GI | 42528009 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00177278 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAAA AAACAAAAGA CGATACCATT ATAATAAAGT TATATGAGGG GATACATCTG
GAAATATACG ACACTTATAC CGAGAAATCA TATAGTTTAA AAGGAGAACC TAGGAATGTT
TTTAGAATCG ATTACTGCTT TCAAGGGCTT CTGGAAGGTA AATTTGAAAA TCAAACTTTT
TCGTATTTAG GAGAAAAAGA AACAGCTATA AATTATGAAA AAGTTGCATT ATCAAAAAGC
TTTTTTCCGT TGAAGTTTTA TAAGGGTATA AGTATACTAT TCTTTCTTGA TAAAATAAAT
TCGAATTTCA AAAATACTGC ACAATTATTT AATATAGATA TTGAAAAAAT ATGCAAAAAT
TTAGATTTGC AGGACGGATG GTATAAAATA AAAATTAATT CCGAGATCTC TTATATAATG
AATACACTGT ATGAAAAACA AAGCTTGAAA CATATAGAGT ACTTTCAAAT TAAATTATTC
GAAATTCTAT ATCTTTTAAG TGTAATCAAT ACGGAAGAAT ACCAAAAAGA AGAATTTTAT
TCGGGTTATC ACATCAATAA GGTAAAAAAA ATTCATGAAT ATGCCGTTAA TAATATAGAT
AAAAATATAT CTTTTAAAAA GATGGTTAAA AATGAAGATT TAAGCTACAC TATTTTTCAA
AAATTATTTA AGCAAATTTA CGGAGAAAGC CCTTACTCAT ATTTAAAAAA ATATCGATTA
GAAATTGCAG CATTTTATAT TTCCTCTACC GATAGAAAAA TTACCGATAT AGCTATAAAT
TGCGGATACT TAAATGCAAG TAAATTTTCT GATGCATTTA AATCCGTTTA CGGCATCAGC
CCAATCCAAT ACAGAAATGG AGAAAAACCT ACAATAACTA AATAA
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| Protein sequence | MKEKTKDDTI IIKLYEGIHL EIYDTYTEKS YSLKGEPRNV FRIDYCFQGL LEGKFENQTF
SYLGEKETAI NYEKVALSKS FFPLKFYKGI SILFFLDKIN SNFKNTAQLF NIDIEKICKN
LDLQDGWYKI KINSEISYIM NTLYEKQSLK HIEYFQIKLF EILYLLSVIN TEEYQKEEFY
SGYHINKVKK IHEYAVNNID KNISFKKMVK NEDLSYTIFQ KLFKQIYGES PYSYLKKYRL
EIAAFYISST DRKITDIAIN CGYLNASKFS DAFKSVYGIS PIQYRNGEKP TITK
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