Gene TDE2426 details

Gene Information

• Locus tag: TDE2426
• Symbol: nusG
• ID: 2739851
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2455332
• End bp: 2455889
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637161317
• Product: transcription antitermination protein NusG
• Protein accession: NP_973025
• Protein GI: 42527927
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR00922] transcription termination/antitermination factor NusG

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000129049
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAGG CTTGGTACAT TCTTCATACC TATTCGGGTT ATGAGAATAA AATTGAAAGA 
ACAATACGTA CTCTGATAGA AAAAGGGATT ATCTCCGCTG ATTTTGTTAC AGATATAAAA 
ATACCTGAAG AACTTGTAAT TGAAAATAAG GGCGGAAAAA AACGCAATGT TAAGCGCAAG 
TTTCTTCCCG GTTATATGCT GGTCGAAATG AACCTTCCCG ATCTTGGCTG GAAAAGTGTT 
TGCTCCGAAA TCCGCAAAAT TCAGGGTGTT ACAGGTTTCT TGGGAACGGC AGGCAATGAA 
AAACCTCAGC CTATTTCTCC CGATGAAGCA AAGGAAATCC TGCAAAAAAC AGGCGAAATT 
AAGGGCGACA AGAATATCCG AGTTATTCAA AATTTCAGTG AAGGACAGCA TGTTAAAATC 
ATCGAAGGTG CTTTTGCCTC GTTTACCGGC GTCATCGATG AAGTTATGGC AGATAAAAAT 
AAGTTAAGAG TTATGGTTGC GATCTTCGGC CGTACTACAC CGGTTGAAGT CGAAATGTCT 
CAAGCCGAAA TCATTTAA 

 

Protein sequence

MAKAWYILHT YSGYENKIER TIRTLIEKGI ISADFVTDIK IPEELVIENK GGKKRNVKRK 
FLPGYMLVEM NLPDLGWKSV CSEIRKIQGV TGFLGTAGNE KPQPISPDEA KEILQKTGEI 
KGDKNIRVIQ NFSEGQHVKI IEGAFASFTG VIDEVMADKN KLRVMVAIFG RTTPVEVEMS 
QAEII