Gene TDE2396 details

Gene Information

• Locus tag: TDE2396
• ID: 2740698
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2423740
• End bp: 2425488
• Gene Length: 1749 bp
• Protein Length: 582 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637161287
• Product: putative inner membrane protein translocase component YidC
• Protein accession: NP_972995
• Protein GI: 42527897
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0706] Preprotein translocase subunit YidC
• TIGRFAM ID: [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain; [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAAAA ATACTGTTTT GGCCGTTGTG CTATCAATGC TTGTTTTCGG AGGGTGGCTG 
TATATCCAGC AAAAATACTT CCCTACCGAA TATAATGTTC CCCAAAAACC TGTTGCTCAG 
GCTCAGGGGC AAAATCCGAC TTCATCTGAA ATTGCCGTTC AAACTTCTTC AAATCAAATT 
TCAAATTCGA TGATTGAGGC TGTTGCAGAT TCGGACTATC CTTCAAGAGA ACAAACCTAT 
GTTATTGAGA CCGATATTAT CCGTGCTGTT TTTACAAACA AGGGCGGAGA TATTATTTCT 
TATAAATTAA AGGAACATGC TTCAGCAGGA AGCGATGAGC GTGTTGAAAT GATAGAAAAT 
GTTACCGAAA GGAACCGGGC TCTTTCTTTG GCTTTAGGCG GTCATGATGC TCAAGCTGTC 
GATTTACTTT TTAATGTAAA AGAAGAAAGT CTTTCCGACG GGAGAAAGCA GATAGGCTTT 
TATCGGGACA TAAAGCTAAA AAATACGGAC GGTTCGGAAA CCGTTTTTAC TCTTGCAAAA 
CGCTATACCT TTATCCCCGG CGATTATATG TTTACCCTTG AGGTTACTAT TGACGGAAAA 
GAGGGAATGA GGGGACTTTC TTTCGGGGAC AGCGCTTATA CTTTACGAAG TGCTCCTCAG 
ATCGGCCCTG AATGGGATAA GGTAAACGAT AAATACGAAT ACAGAGCCCT TTCTTATTTT 
GCAAATGAAA AGAAAAAGGA AGACCGCAGC ATTACAGACG GAAAAACAAA GGCTGTAAAC 
GATTTAGCTT CATGGGTAAG CGTTTCAGGC AAGTACTTTT CCTTTATCAT TATACCCAAA 
GACCCCATTC AAAAGATGTT TTTTTCAGGG ATAAAGGAAG AAGGAGCAAA ACTTCACAAT 
TCCCAGTTTT TTATTTCACG GCAGCCGATT GTGGGAAATG CAGCCTATGA CCAATACAGG 
GTCTACATAG GACCGAGTTC CGAAAAGATA TTAAACTCTT ATAATTCTGC AGCAGCCAAT 
AATTACGGTT ACGAAAATTT AAGAATAGAC AGCCTTGCTG CATCAAGCGG CTTTTTAGCT 
CCCTTGGAAA GAGTTTTAAA ATTCGTGATG GAAATTTTTT ATAAAATTAT TCCTAACTGG 
GGTGTAGCCC TTCTATTACT TACTCTTTTA ATGCGTATAA TCTTTTTCCC GCTTACCAAA 
AAAAGCTCGG AAGCCACAAA GCGTATGCAG GAGCTTCAGC CTCAGATTAA TGAGCTGCAG 
CAAAAGTACA AAAATAATCC TCAAAAGCTC AACGCAGAGA TGGTCAAGTT CTATAAAGAA 
GCAGGTTATA ATCCTGCATC AGGCTGTCTG CCTCTTCTTA TCCAGCTTCC ATTCTTATTT 
GCGATGTTCG GATTATTCAA TAATTATTTC GAATTTAGAG GGGCAAGTTT TATTCCCGGC 
TGGATTCCTG ACCTGTCGGT GGGTGACAGT ATTTTGAAAT TCGGTTTTAC TATTCCGTTT 
TTAAATTGGA CGGATTTAAG ATTGCTTCCC ATCATTTATA CCGCTTCTCA GCTTTTGCAC 
GGTAAGCTGA CGCAAACTCC GGGGCAGTCT CAGCAAAACC CTTCTATGAA GATAATGATT 
TATTTTATGC CTTTGTTCTT CTTCTTTCTT TTTTATAATG CTCCTTCGGG GCTCTTATTG 
TTCTGGACCT TTTCCAATAT TTTGATGCTT TTACAGCAGC TTATAATCAA TAAGTCCATG 
AAGAAATAA 

 

Protein sequence

MKKNTVLAVV LSMLVFGGWL YIQQKYFPTE YNVPQKPVAQ AQGQNPTSSE IAVQTSSNQI 
SNSMIEAVAD SDYPSREQTY VIETDIIRAV FTNKGGDIIS YKLKEHASAG SDERVEMIEN 
VTERNRALSL ALGGHDAQAV DLLFNVKEES LSDGRKQIGF YRDIKLKNTD GSETVFTLAK 
RYTFIPGDYM FTLEVTIDGK EGMRGLSFGD SAYTLRSAPQ IGPEWDKVND KYEYRALSYF 
ANEKKKEDRS ITDGKTKAVN DLASWVSVSG KYFSFIIIPK DPIQKMFFSG IKEEGAKLHN 
SQFFISRQPI VGNAAYDQYR VYIGPSSEKI LNSYNSAAAN NYGYENLRID SLAASSGFLA 
PLERVLKFVM EIFYKIIPNW GVALLLLTLL MRIIFFPLTK KSSEATKRMQ ELQPQINELQ 
QKYKNNPQKL NAEMVKFYKE AGYNPASGCL PLLIQLPFLF AMFGLFNNYF EFRGASFIPG 
WIPDLSVGDS ILKFGFTIPF LNWTDLRLLP IIYTASQLLH GKLTQTPGQS QQNPSMKIMI 
YFMPLFFFFL FYNAPSGLLL FWTFSNILML LQQLIINKSM KK