| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2387 |
|---|
| Symbol | malQ |
|---|
| ID | 2740689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 2416180 |
|---|
| End bp | 2417802 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637161278 |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | NP_972986 |
|---|
| Protein GI | 42527888 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1640] 4-alpha-glucanotransferase |
|---|
| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA GTTCAGGTAT TATTTTACAT CCCACCTCGT TACCTAATGA TGAAGGCATA
GGGACAATCG GTAAAGAGGC TTTTGCCTTT ATCGATTGGT TAAAAAAAAC AAGAACGGGA
GTTTGGCAGA TGCTTCCGAT TGGCCCCACC GGTTATGGAG ACTCACCCTA CGCTTCTTTT
TCGGCCTTTG CAGGAAACCC TTATCTTATA AGTCTTCAAG ATCTTTATGA AAAAGGCTTT
TTAGAAAAAA GAGATTTTAC CGAATACAAA AAAATCGTAC AAGAAAATAC TGATCCTAAA
AGAGCGGATT TCGGTTTAAT CCATTACCAT AAAACAAAAA TGTTAAAAAA AGCGGCAGCA
TCTTTATTGC ACAAAATGGA AAGAGACTCA TCTTCAAAAG AAGAACTTGA AAATTTCTAC
CAAGAAGAAA GTTTTTGGCT GGACGGATAT GCAGCCTTTA TGACAATTAA AGAAGACTAT
GAAGAAAGAC TAGATAAAGA AAATTTAGTG CAAGGAATCT GGAATGAAGT TTGGCCCAAG
GAGCTTGCCT TAAATAAAAA AGATAAGATA AAAGAATTTC TAGGCAAACA CTCCGAAGAA
TATGAAACCC AAAAGATTAT ACAGTTTTTC TTTTTTTCGC AATGGAAAAA ATTAAAAGAA
TACGCTGAAA AAAACGGTAT ACAACTTATA GGAGATATTC CGATATTTGC GGCAATGGAT
TCAGCCGATG TTTGGCAAAA TCAAAGCTTA TTTTTACTGG ACAAAGAAGC TACACCTAAA
GCCGTCGCCG GTGTACCTCC CGACTTTTTT AGCCCTACGG GACAGCTTTG GGGCAACCCT
CTTTATGACT GGGCTAAGAT GAAAAAGGAC AGCTACCTAT GGTGGAAGGC CCGCATAAGA
CATACCCTAA AACTATTCGA CATAATACGC CTCGACCATT TTAGAGGCTT TGAAGCCTTT
TGGGCTATCC CCCAAGGTGC AAAAACTGCT CAAGAAGGAA AATGGGTGAA AGGCCCTGAC
CATCATTTTT TTGAAGAAAT ACAAAAGGAT CTGATTTCAT TGGATGAAAA ATACAGGGGC
GAGCTTCCTA TACTAACTGA AGACTTGGGA GTTATAACCC CTGAAGTTGC CCGCCTACGA
GATGATTTTA ATTTCCCGAC GATGAAGATA TTGCAATTTG CCTTTGACTT AAACGAATTA
AAATCGGAAA ATCTGACTAA TCCTTATCTG CCTCATAACC ACAAAAAAAA CTGTGCCGTA
TATACCGGTT CCCACGATAA CGACACAATC ATGGGTTGGC TTGAAGGTTC TTCCGATGAG
ATGCTGAAAT TTATTTATAC CTATCTTTAT GGAAAAAAAG CGGATAAAAG AATTTGCTCC
ATTTTAAACA CTTATGAATT TAAAAAAGAA TTAGCCTCCG AAATAATCCG AAAAGCGTTT
TCTTCCGTGG CGGATTTTGC AGCCGTGCAG ATGCAGGACC TTTTGTTTTT AAATTCTGAA
GCAAGAATGA ATGCACCTTC AACAGTCGGA AAAAACTGGC AATGGAGAGT AACCGGGTCT
TATGAAAACT GCGAGATGAC CGAAAAATTG GAGCTTTGGA ATGTTTTGTA CAATAGGGTT
TAA
|
|---|
| Protein sequence | MKRSSGIILH PTSLPNDEGI GTIGKEAFAF IDWLKKTRTG VWQMLPIGPT GYGDSPYASF
SAFAGNPYLI SLQDLYEKGF LEKRDFTEYK KIVQENTDPK RADFGLIHYH KTKMLKKAAA
SLLHKMERDS SSKEELENFY QEESFWLDGY AAFMTIKEDY EERLDKENLV QGIWNEVWPK
ELALNKKDKI KEFLGKHSEE YETQKIIQFF FFSQWKKLKE YAEKNGIQLI GDIPIFAAMD
SADVWQNQSL FLLDKEATPK AVAGVPPDFF SPTGQLWGNP LYDWAKMKKD SYLWWKARIR
HTLKLFDIIR LDHFRGFEAF WAIPQGAKTA QEGKWVKGPD HHFFEEIQKD LISLDEKYRG
ELPILTEDLG VITPEVARLR DDFNFPTMKI LQFAFDLNEL KSENLTNPYL PHNHKKNCAV
YTGSHDNDTI MGWLEGSSDE MLKFIYTYLY GKKADKRICS ILNTYEFKKE LASEIIRKAF
SSVADFAAVQ MQDLLFLNSE ARMNAPSTVG KNWQWRVTGS YENCEMTEKL ELWNVLYNRV
|
|---|
| |