Gene TDE2353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2353 
Symbol 
ID2739962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2389269 
End bp2390516 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content45% 
IMG OID637161244 
Productflagellar hook-associated protein FlgL 
Protein accessionNP_972952 
Protein GI42527854 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAA GAATTAGTAC GAATATTCAG CACACGGACA GCAATTTTTC GATGAGGAAT 
CAGGAGTCGA GACTTCATAA TCTAAATAAT CAGATTCAGT CCCAACGAAG GATAAACCAA
CTTAGAGATG ACCCCGTTTC TGCAGGACAC TCGGTAAGAT ATAAGTCCTA CCTTGCCCGC
CTCGAAAGGT TTGAAAAAAA CACAAAAACC TTGAGAGATC AATATATGTC GGCCGAAACC
TATATGAATA ATTCGCTCCA AGTTGTTCAG CGTTTAAGAG AGCTTTCGGT ACAGGGAGCA
AACGGAACCT ATACACCGGA CGACTTAAAA GATATGGCAG CCGAGGCCGA TGAACTTTTA
AAAGAACTTG TCCAAAACGG AAATGCCGTA AACTCGGACG GTGTCAGAGT TTTTTCGGGA
ACAAAAAGTT TTACCGAGCC CTTTGAAACC GTGATGGGAG ATGTGGACGG AGCAGGTTCC
GCCCTTATAA CTCAGGTCAG ATACAACGGC ACGGTCGATT CAAAGGAAGT TGAAACCGAT
GAGCTTTCTT TTATGAGAGC CGATCAGGCC GGGAACAGGG TATTTTGGGC CGAGCGGCAA
ATTCTTATCT CGGAAACCGA TGCCCGAAAC TTTGTCATAA AAGAAGACAC AAGCATCGAG
GTTGACGGGG TTGAGATTCC CTTAATTGCA GGCGACAATG TTTATGCAAT TATGTCAAAG
ATAAACGATT CGGGAGCCGC AGTAAAAGCA AGCCTTGACC CGATAACAAG CGGTTTAAAC
CTTACGACTA CCGATGCCCG CCAGCTTTGG CTGAGAGATG CGGAAGGAAG CACTGTTTTA
TCCGAATTGG GCTTGATAAA GGCCGAACAA AGACCACCAT ACAATTTAGC AAATTCGGTA
CGCGTTTCGG GAGGCTCTCT TTTTGATGCA GCCATTGCCG TCCGCGATGC CTTCCTTTCG
GGAGATCAAG AAGCCTTGGG CGGAAAGGTT TTGGGAAGCC TCGATGAGGG CATACATAAT
CTTACTACAA GAATGGCCGA AACAGGTTCC AAGTATTCGA GAGCCGAAGT TATCTTGGCA
CGCATTGATA CGCAAACCTT AAATGTAACG GCAGCAGAGT CGCGCGAAGC CGACTTGGAC
ATTACAAAGG CGATAACCGA CTTAAAGATG TTTGAACATA CGCATCAAGC TTCTTTAAGC
GTATTGGGAA GACTTTACAG GGATTCGCTT TTAAACTACT TACGATAA
 
Protein sequence
MMKRISTNIQ HTDSNFSMRN QESRLHNLNN QIQSQRRINQ LRDDPVSAGH SVRYKSYLAR 
LERFEKNTKT LRDQYMSAET YMNNSLQVVQ RLRELSVQGA NGTYTPDDLK DMAAEADELL
KELVQNGNAV NSDGVRVFSG TKSFTEPFET VMGDVDGAGS ALITQVRYNG TVDSKEVETD
ELSFMRADQA GNRVFWAERQ ILISETDARN FVIKEDTSIE VDGVEIPLIA GDNVYAIMSK
INDSGAAVKA SLDPITSGLN LTTTDARQLW LRDAEGSTVL SELGLIKAEQ RPPYNLANSV
RVSGGSLFDA AIAVRDAFLS GDQEALGGKV LGSLDEGIHN LTTRMAETGS KYSRAEVILA
RIDTQTLNVT AAESREADLD ITKAITDLKM FEHTHQASLS VLGRLYRDSL LNYLR