| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2341 |
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| Symbol | |
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| ID | 2739436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2377956 |
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| End bp | 2379308 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637161232 |
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| Product | membrane-associated zinc metalloprotease, putative |
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| Protein accession | NP_972940 |
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| Protein GI | 42527842 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00281256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAGA TTTTAATAGG TTTGATTATA TTGAGTATCA TGGTCTTTAT CCATGAGCTT
GGACATTTTA TTGCCGCAAA ACTCTGCGGT GTTGTGGTCG AAAGTTTTTC GATAGGCTGG
GGTCCTGTTC TTTTTAAAAA AAAGAAGGGA GATACGGAAT ATAGAATCTC TGCAATTCCC
ATGGGCGGTT ATTGCGGCAT GAAGGGAGAA AAAGCCTTTC AGCAGGCAAT CGAAGAAAAT
CTCCCTGCAA TCCCGAAAAA AGAAGGAGAG CTTTACGGGG TGCATCCTTT TAAGCGGATT
ATAATTGCCT TTGCCGGTCC CTTTGCAAAC TATATAAGTG CGGTTCTTGC TCTGGCTATT
GTAAGTGCTA TAGGTTCAAG CTATTACACA AGCTCGAATA AGATAGCTCC CGTTTACTAT
TATAACGAAG CCGACGATTC TCCCGCCCGC GAGGCGGATT TAAGGATGGG GGATGTAATT
TTAAGCATTA ACAGCGAAAA GACCGAAACC TTTGCCGATA TCGTGCGCCT CATTGTGCCT
GAAGCAAAGG AAGAGGTTAC GCTGGAAATA GAAAGAGAAG GGCAAATCCT CACAAAAAAA
CTTAGGCCAA AACTCGATCC AAAAACAGGT GCAGGTATAA TAGGCTTTTA TTCTTTTATT
CCCCTTGAAA TTGACGGTGT AAAGCCTTCT TCATCTGCCG AACTTGCAGG TCTTAAAAAA
GGCGACCTTA TTACGGAAGT GAACGGAATT GAAGTTGCCA ATACGGTAGA CTTAAACCGT
GCCCTAGACG GTATAAGCGG CAAGACTGCC GAATTAGGCA TTTTAAGGGA CGGAAACAAG
ATTACAAAAA CCGTAAACCT TATCAGAACC GAAAACGGAA TAGACCTTGG GCTAAATATT
AAAAACATCA AGGTAGAGAT TCCAGGAACA GGCATTTTTA AAAGCATAGT GAACGGCTTT
GTTTTAACTC ACAAGGCCTT TATTTTGACA TTTAAAAGTT TAGGCCTTTT GTTTAAGGGA
GTTGACTTTA GGCAAGCCGT TTCAGGTCCC GTACGCATTA CCCACATGTT GGGTGATGTT
GCCGCCCAAG GTTTTAAGGC CGGCTTTTTA ATCGGGCTTT CGGATATCTT AAACTTTGTA
AGCATAATTT CTATTTCTCT TTTTATAATG AATTTATTGC CGATTCCGAT TTTGGACGGA
GGCTTAATTC TTTTTGCCTT TATAGAATTT ATATTTAGAA GGCAAATCCA TCCGAAAGTG
CTGTACTATG TTCAGTTTAT CGGCATAGCC TTTATCGGCA TAGTTTTTAT ATTCGCCCTC
TGGGGAGACA TAGGATATTT TTTAGGAAGG TAA
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| Protein sequence | MVKILIGLII LSIMVFIHEL GHFIAAKLCG VVVESFSIGW GPVLFKKKKG DTEYRISAIP
MGGYCGMKGE KAFQQAIEEN LPAIPKKEGE LYGVHPFKRI IIAFAGPFAN YISAVLALAI
VSAIGSSYYT SSNKIAPVYY YNEADDSPAR EADLRMGDVI LSINSEKTET FADIVRLIVP
EAKEEVTLEI EREGQILTKK LRPKLDPKTG AGIIGFYSFI PLEIDGVKPS SSAELAGLKK
GDLITEVNGI EVANTVDLNR ALDGISGKTA ELGILRDGNK ITKTVNLIRT ENGIDLGLNI
KNIKVEIPGT GIFKSIVNGF VLTHKAFILT FKSLGLLFKG VDFRQAVSGP VRITHMLGDV
AAQGFKAGFL IGLSDILNFV SIISISLFIM NLLPIPILDG GLILFAFIEF IFRRQIHPKV
LYYVQFIGIA FIGIVFIFAL WGDIGYFLGR
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