| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2335 |
|---|
| Symbol | |
|---|
| ID | 2739430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 2369781 |
|---|
| End bp | 2372018 |
|---|
| Gene Length | 2238 bp |
|---|
| Protein Length | 745 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637161226 |
|---|
| Product | ATP-dependent DNA helicase UvrD |
|---|
| Protein accession | NP_972934 |
|---|
| Protein GI | 42527836 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000479464 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTCAAC CGGATTATTT GAACATTCTT AATGAAGAGC AGCTTTCGGC TGTTAAGCAT
CAGGGTTCTC CTCTTTTGAT TCTTGCGGGA GCGGGCTCGG GAAAGACCCG GGTTATTACC
ACCAAGATTG CATACCTTAT TGCCGAACAT AATATCGAGC CTGAACGAAT CCTCGCCGTA
ACATTTACAA ACAAGGCTGC CAAAGAAATG TCCGAAAGAG CATCTAATCT GGATAAAAGA
GCAGAGCGGG CAATGATCCG AACCTTTCAC TCCTTCGGAG CGTGGATCTT GCGTATGTAT
GCGGAATGGG CAGGGCTTTC ACATAATTTT ACAATCTATG ATGATGACGA CGCTCTTTCC
CTTTTAACCC AAGCCTCTCC CGCCCTTACA AAAAATGCGG CCCGCGGTAT CATAAAAAAA
ATTTCGCGTG CAAAGGATTA TTGCCTTCTC CCCGATGATC CGCTTTTGCA GGAAGTTGAT
CCTAATCCAG AGTTTGCAAA AATCTATGCC GACTATCAAA AGAGACTAAA AGAAACCGGA
AACGTAGACT TCGGGGATCT CATCATGATT CCTGTTATGC TCTTAAAAGA AAATCCGCAA
ATCAGAGCCT CTATTCAAAA CCGATTTTCC GTAATAATGG TCGATGAATA TCAGGACTCG
AACATAGCCC AATTTGAATT CTTAAAAGTC CTCACAGGAG AAAATACCTA TATCTGTGTT
GTAGGAGATG ATGACCAATC TATCTACCGT TTCCGCGGAG CCGAAGTTCA AAACATATTA
ACCTTTGCCG ATACTTTTAA AAACACGAAG ATAATAAAGC TCGAAAAAAA TTACCGCTCA
TATTCGGAAA TTCTTGCGGT CGCAGATTCC GTCGTAAAAA AGAATACGGG CCGTCTCGGT
AAAACCCTTG TTGCCGAAAG AGGAAAGGGA CAAAAGCCTC ATATTTATTT TTTGCCCAAT
CAGGAAACCG AGGCAGAACT TTGTGCCCGC CTTATATCGC AAGAGGTCGA AAACGGAGGA
GCATATTCCG ACTGGGCTGT CTTGTACAGG ACTAACGCCC AATCCTTAAA TTTTGAAACG
GATTTTTTAC ACAAAAAAAT TCCATATCAG GTCATAGGCA CCTTAAAATT TTATGAGCGG
GAAGAAATAA AGGATGCTCT TGCCGTTCTT GCCCTTATTT CAAACGGAAG GGACGAGGTG
GCTTTAAGGC GCATCATAAA CAAGCCTGCA CGAGGTGTAG GAGAAATTAC TCAAAAAAAA
TTAATTGATC TTTCTCGAGA ACTTATGTTC TCTCAAAAAA GCGATGAACT CATGTTGGAG
TCCAAGGACG ATTACATCTC GGCCATGTCT GTGCTTATGA ATTCGGTCTC CCTCACAAAA
AAAGCCAAGG ATGGCCTAAA GAATTTTTTA AACACCATAA AGGAATTACG CAGTATAATA
GAAGCCGGAG ACATCTTTTT TAAAAAAGAA GAACCAAAGG GCGAAGGCTT GGCTCCTTTT
ATCTATGAGG TTTTAAAACA ATCGGGCTTT GCCGAATATT ACGAATCGGT AGACTCGGCT
TCCGGCACCC AAAAGACTGC AAACTTAAAC GAGCTTGCAA ACACTGCCTC GCTCTACGAT
TTTTCGGTAA AGGGCTTGAG CGAATTTTTA GAGCACATCG AATTGGATAG AAGCCTTGCC
GAGTCCGAAG AAAAAAAAGA TTCCGTAAAT CTCATAACCA TTCATAACAC AAAAGGCTTG
GAATTTAAAA ACGTAATTAT CACGGGCCTT GAAACGGGAG TCTTTCCCCG CGACAACGGA
AACTTTGATG AGCTTGAAGA AGAAAGAAGA CTTATGTATG TAGCCTGCAC CCGTGCAAAG
GATGCACTCT ACATGACAAG CTGCTCCTCG CGCCGCCTAT ACGGCAGCCT GACATTTACC
CAGCCAAGCC GCTTTATCTT TGAAATAGAT AAAGACCTAG TAAACATCTC GGAGGCTTCA
TCTCCTTATT CTACTTTTTC AGGCAGCTTC GGGAAACAAA TCCCTGCCGA TTTTAGCACA
AAAAAAGAAG AACATCCCCT CCTTTCCAAA TGGAAGAAGG GAGAAAAAAT TTATCACGAC
GATTACGGCT ACGGGGCAAT AATTAAGGCC GATATTTCAA GCGGAGAACT TGTAGTAAAC
ATCCAATTTG AAACCGGCCT TGTAAAACGC TTTATGCCCG AATATCAGGC AAACGATATG
ACAATAATAA AAGATTAA
|
|---|
| Protein sequence | MAQPDYLNIL NEEQLSAVKH QGSPLLILAG AGSGKTRVIT TKIAYLIAEH NIEPERILAV
TFTNKAAKEM SERASNLDKR AERAMIRTFH SFGAWILRMY AEWAGLSHNF TIYDDDDALS
LLTQASPALT KNAARGIIKK ISRAKDYCLL PDDPLLQEVD PNPEFAKIYA DYQKRLKETG
NVDFGDLIMI PVMLLKENPQ IRASIQNRFS VIMVDEYQDS NIAQFEFLKV LTGENTYICV
VGDDDQSIYR FRGAEVQNIL TFADTFKNTK IIKLEKNYRS YSEILAVADS VVKKNTGRLG
KTLVAERGKG QKPHIYFLPN QETEAELCAR LISQEVENGG AYSDWAVLYR TNAQSLNFET
DFLHKKIPYQ VIGTLKFYER EEIKDALAVL ALISNGRDEV ALRRIINKPA RGVGEITQKK
LIDLSRELMF SQKSDELMLE SKDDYISAMS VLMNSVSLTK KAKDGLKNFL NTIKELRSII
EAGDIFFKKE EPKGEGLAPF IYEVLKQSGF AEYYESVDSA SGTQKTANLN ELANTASLYD
FSVKGLSEFL EHIELDRSLA ESEEKKDSVN LITIHNTKGL EFKNVIITGL ETGVFPRDNG
NFDELEEERR LMYVACTRAK DALYMTSCSS RRLYGSLTFT QPSRFIFEID KDLVNISEAS
SPYSTFSGSF GKQIPADFST KKEEHPLLSK WKKGEKIYHD DYGYGAIIKA DISSGELVVN
IQFETGLVKR FMPEYQANDM TIIKD
|
|---|
| |