Gene TDE2296 details

Gene Information

• Locus tag: TDE2296
• ID: 2740261
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2334373
• End bp: 2336427
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637161185
• Product: hypothetical protein
• Protein accession: NP_972896
• Protein GI: 42527798
• COG category: [S] Function unknown
• COG ID: [COG3391] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTCG GTAGAAAATG TCGTATAATT GTTTTTATAA GCTTAGTCTT ATTTACTTTT 
CCTGTTTTTT CACAAGATAA GAATTTTACC GATAAGCCGT CCTCGTCGGA TAAGAGGGTT 
GCTTCCGAAG AATTTAGGCG GGGTGTTCAA GCCTATTATC GAGGAACCTT TAATGAGGCC 
ATCCTTTTAT TCGAAAAAGC TCTTTCTTAT CTGCCCGATG AGTCCTTAAT TTTAGATTGG 
CTTGGAAAGG CCTATTACAG CTCCGGTGTT GAAGGTGCAG CCCTGACTCA GTGGGAATTG 
GCCGAGGCAG CAGGTTACGG CGGAATGCTT TTAAAAAACA AGATAGAAAT TCTAAAAGAA 
TCGAGGAGCC TTACTCCCTA TTCTTCAGAT AACATAAAGT ATGTGGAAAA CTCTTCCTTT 
AGCTCAAAGA ACGGCACTGT AGAGCTTTTC CGCCAACCTC TTTCGATAGC AGCTGTTTCC 
GACGGCTCCT TTTGGATGAC GGCTTACGGA TCAAACGAGC TTTTGCACTT TAATGTAAAC 
GGTATTATCT TGGACAGAAC AAAGGGGCCT ATTCAAGGTT TTGACAGGCC TTTCGATGTT 
ATAGCCCTAT CGGACGGAAA TCTCTTGGTT TCGGAATTTG CTGCCGACAG GATTTCTCTC 
CTCGATAAAA ACGGTTCGTT TATAAAATCT TTCGGAACAA GAGGAAGGGG AAACGGAGAA 
TTTATAGGCC CTCAGTTTTT AGCTGAAGAC GAGTACGGCA ATATCTATGT TTGCGATTTT 
GGAAATGCAA GAATCGTTGT TTTTTCTTCT GCAGGAGAAC CTCTTTTTAC CTTTGGAAAA 
AAAAGCGGCC TTTTCGGGGG CTTTACGGCT CCTGCGGGGA TAGCTGTAGT TGACGGGCTT 
GTCTATATTG CCGATGCAAT AAAGGGCGCT GTTTATACCT TCGATACGGC CGGCAACTTT 
GTTCAATCCC TCCTGCCTGA AGGCACCTTA AAGCAAATAG AATCCCTTAG GGAATGGAAC 
GGCAATTTGG TTGCTTCTGC AGGGAATAAG GCTTACCTTA TCGATATTGC TTTTTCGACT 
GTAAGCGAGT TGACGAGTCT GGGAAATGTT CCTACAAAGA TTACGGCTGC GGTTCCCGAT 
GTGAACGGAA GTCTTCTTTT AATAGACCAT AAAAATCAAA CGGTAGAAAT AACTTCAAGA 
ATAAATGAAC TTGCAGGCGG CCTTTTTGTA TTGATAAAAA AAGTTTATTC AGATAAATTC 
CCTGAAGTCT TGGTTGAAGT AAGCGTACAA AACCGCGACG GCAAACAAAT TGTAGGTTTG 
ACTCAGGATA ACTTTATAAT CACGGAGGGA AACAGGCCTG TTGCCGATTA TTCTTTGACC 
GGTTCTTCCT ATCTTAATAA AACTTGCGAT ATAGCCGTCA TTGTTGAAAG ATCTCCCAAT 
TCCTTAAAGG AAAAAGCCTT AATAGAGGCT GCCTTAAAGG AAATTGCAGA AGCAATGCAG 
GGCAGGGGAA AGATAAGCCT TATTTCAGCC TCATCTATTC CCGCTCTTGA GGGAAAATTC 
TCTCCTGCCG ATTTGATAAC CCTGCCTAAC CGCATAAAGA CTCCGGCCTC GTCCGACTGG 
AAATTAGATC TTGCTTTGAG GCTTGCCGTC GGGGAGCTGA TAAATGCCGA ACAAAAAAGA 
GCCGTTCTTT TTTTGAATTT CAGCGATCCT AATTCGGATA ATTTTAAGCA GTATAATTTA 
AACGACCTTG CTTCATACAT GAAAAATAAT AATATACGTT TTTATCCGAT TAGTTTAAAA 
AAGGGAGCTC CTGCTTCCGA AATGAGCTAT CTTGCAAAAA AGACGGGCGG TAAGACCTCA 
TACATCTATG CCGAAAGGGG CTTAAAACCT CTTATTGACG ATATTATCGA AAAGCCTTTG 
GGAATGTACC AGCTGAAATA TACTTCTACC ATGTCCACCG ACTTCGGTAG GTCATTTTTA 
CCCGTAGAAG TAGAGGTTCA GCTTTTGGAA AGATCAGGCC GAGATGAAAT AGGATACTTT 
GCTCCATTGG AGTAG 

 

Protein sequence

MKFGRKCRII VFISLVLFTF PVFSQDKNFT DKPSSSDKRV ASEEFRRGVQ AYYRGTFNEA 
ILLFEKALSY LPDESLILDW LGKAYYSSGV EGAALTQWEL AEAAGYGGML LKNKIEILKE 
SRSLTPYSSD NIKYVENSSF SSKNGTVELF RQPLSIAAVS DGSFWMTAYG SNELLHFNVN 
GIILDRTKGP IQGFDRPFDV IALSDGNLLV SEFAADRISL LDKNGSFIKS FGTRGRGNGE 
FIGPQFLAED EYGNIYVCDF GNARIVVFSS AGEPLFTFGK KSGLFGGFTA PAGIAVVDGL 
VYIADAIKGA VYTFDTAGNF VQSLLPEGTL KQIESLREWN GNLVASAGNK AYLIDIAFST 
VSELTSLGNV PTKITAAVPD VNGSLLLIDH KNQTVEITSR INELAGGLFV LIKKVYSDKF 
PEVLVEVSVQ NRDGKQIVGL TQDNFIITEG NRPVADYSLT GSSYLNKTCD IAVIVERSPN 
SLKEKALIEA ALKEIAEAMQ GRGKISLISA SSIPALEGKF SPADLITLPN RIKTPASSDW 
KLDLALRLAV GELINAEQKR AVLFLNFSDP NSDNFKQYNL NDLASYMKNN NIRFYPISLK 
KGAPASEMSY LAKKTGGKTS YIYAERGLKP LIDDIIEKPL GMYQLKYTST MSTDFGRSFL 
PVEVEVQLLE RSGRDEIGYF APLE