| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2279 |
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| Symbol | |
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| ID | 2740029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2313871 |
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| End bp | 2315361 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637161168 |
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| Product | HD domain-containing protein |
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| Protein accession | NP_972879 |
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| Protein GI | 42527781 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.911233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTCTCA TGGAAAAAGA TAAAAGAATA ATCGTTGATT CGGAAAAAAT TGAAACAGCC
ATACGTTTGG GTGTTCCTAT CGTTATAACT TCATATACTT TGCCTAAAGA AACTGAAGTT
TATATTACGG ATGTTATATC GGAATTTTTA AGGCAGCTGC ATTGTACCGA TATTACAGAT
TATATCGTAT ATTACACAAA TGAGCTCACA ACAAACGCAA AAAAAGCCAA TACAAAAAGA
GTATATTTTA AAGAAAGAGG CTTAAATATT TCCGATGCCG AAGACTATGA ACAGGGAATG
AAGGATTTTA AAGAAGATAC AATCTCAAAC ATGGATCATT ATCTGGAACT TCAAAAAAAG
GCAGGTCTTT ATATCAAACT GTCCCTTCAA CTTAAAAATG ACAATATAGT CCTTGAAGTA
AGCAATAACT CGGCCCTAAC CCGCCAAGAA TTTAAGAGAA TTTTTGACAA AATAGTCAGA
GCAAGACAAT TTTCATCATT GGATGAAGCC TTTACTCAAG TTTTAGACAA TACCGAAGGA
GCCGGTTTAG GTCTTGTAAT AATGGTTCTA ATGCTCAAAA AAATGGGTCT GGATGAAAAG
TCATACACAA TTGATGTTGT AGACGGAGTA ACATTAAACC GTGTTATTAT TCCCCTAAGA
TTGAAGCTAA AAAAAGAGGC TGTACCTCTT ACAAAGGCTA TTGTAGAATA TATCAACGAA
ATACCGCAAT TCCCCGAAAA TATTATGCAG ATACAGAGGG CTATTAACGA TCCGGAATCA
AAGATGCAAA AAATTGCCCA GCTTATAAGC AGCGATATAG GATTGGCAAC AGACCTTCTA
AAACATGTAA ACTCCGTAGC TTTCGGTCTT TCAAAACCCT GTATGAACAT TGTCGAAGCT
GTCAAGTTCG TAGGCTTGAG AGGAATACAA AACCTGCTTT ACTCTATGGG AACCATCAAA
ATATTGGAAA CAACGGAAAA AGAGCAAAAG GAAATTTGGG AAAATGCTTA CAGGCTGGCC
TTTTTCTCCT TAAATGTTGC AAAACTTACC GGCAAACGCA CTATAGTTGA TGATGCATAT
ATTTGCGGTC TTCTCCATGA CCTTGGAAAG ATTATCCTTG GTTCAATGTA CCCTGAGCTG
CTTGTAAAAC TGGCAGAAAT TCAAGCCGAA AGGAACATAC CGCCTCAGGT TATGGACATG
ATTATGAGCG GAATGGCTCA AGCAGAAATA GGAGCTACCC TTGCAGAAAA GTGGAACTTC
CCCGAACCCA TAGTAGTAAC GATAAGATAT CAGGATAATT TTGAAAATGC ACCCGAAGAA
CATCGAGAAT TGGTTGAAAG CGTTTGCTTT GCAGACTTTA TGCTTAATTT TTCACAAGGG
AAAATAGATT ACTATCAGAT CCCTGAAGCC TTGCTAAAAA GATTCAAAAT AAAGTCGGAA
GAACAACTTA AAAAACTCTG TGAACGCTTT GAATTTGCTT TTTCAAAGTA A
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| Protein sequence | MCLMEKDKRI IVDSEKIETA IRLGVPIVIT SYTLPKETEV YITDVISEFL RQLHCTDITD
YIVYYTNELT TNAKKANTKR VYFKERGLNI SDAEDYEQGM KDFKEDTISN MDHYLELQKK
AGLYIKLSLQ LKNDNIVLEV SNNSALTRQE FKRIFDKIVR ARQFSSLDEA FTQVLDNTEG
AGLGLVIMVL MLKKMGLDEK SYTIDVVDGV TLNRVIIPLR LKLKKEAVPL TKAIVEYINE
IPQFPENIMQ IQRAINDPES KMQKIAQLIS SDIGLATDLL KHVNSVAFGL SKPCMNIVEA
VKFVGLRGIQ NLLYSMGTIK ILETTEKEQK EIWENAYRLA FFSLNVAKLT GKRTIVDDAY
ICGLLHDLGK IILGSMYPEL LVKLAEIQAE RNIPPQVMDM IMSGMAQAEI GATLAEKWNF
PEPIVVTIRY QDNFENAPEE HRELVESVCF ADFMLNFSQG KIDYYQIPEA LLKRFKIKSE
EQLKKLCERF EFAFSK
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