Gene TDE2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2253 
Symbol 
ID2741358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2291143 
End bp2291559 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content37% 
IMG OID637161142 
Producthypothetical protein 
Protein accessionNP_972853 
Protein GI42527755 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0842095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAAC AAGAACGTTT TTTTTATCCT GCAATATTCA CTTATAACGG CAAAAAAGAA 
ATTGCAGTTG TTTTCCCCGA TTTGGGTTGT GCTACCTCGG GAAAAGATGA GGCTGATGCT
CTATTATCTG CACGAGAACT TCTTGGCTGT GTTCTGTGCG GGCTTGAAGA TGATGGAGAA
CCTATTCCTA AGGCTTCTCA CTTAAGTAAT ATAAAAACAG GTAAAAATGA AAAATCCGTT
TTAATTGACG TATATCTTCC TACTTACCGC ATGATGCAAA AAACACGTTC GGTTAACCGA
ACCGTAACCT TACCTGCATG GCTAAATGCT CTTGCCTCGG AGCATAATAT AAATTGTTCA
CAGCTTTTAC AAGAAAGTCT AAAAAAACAA TTTCAAACCG TTTTACAAAC AAGATAA
 
Protein sequence
MKKQERFFYP AIFTYNGKKE IAVVFPDLGC ATSGKDEADA LLSARELLGC VLCGLEDDGE 
PIPKASHLSN IKTGKNEKSV LIDVYLPTYR MMQKTRSVNR TVTLPAWLNA LASEHNINCS
QLLQESLKKQ FQTVLQTR