Gene TDE2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2214 
Symbol 
ID2739490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2253190 
End bp2253525 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content33% 
IMG OID637161103 
Producthypothetical protein 
Protein accessionNP_972814 
Protein GI42527716 
COG category[S] Function unknown 
COG ID[COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.44571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAT ATAAGGGATA TATCGGAAAA ATAGAATACG ATCCGGAAGC AAAAATTTTA 
CATGGAGATG TCATAAATAC ACGTGATGTT ATTACATTCC AGGGTACAAG CGTAGCAGAA
ATAGAAAAAG CCTTTATTGA CTCTGTCGAT GATTACATCA ACTGGTGCCG AGAAGAAAAT
ATAGAACCCG AAAAACCATA TTCGGGAAAA TTCAATATAC GCATATCACC GGAGCTTCAT
AAAAAAATAG CAATCAACGC AAAAAGCTTA AATCTTTCTT TAAATACTTT TGTTGAAAAA
GCATTACAAC ATGAATTAGC ATCTACCGGA ATATAA
 
Protein sequence
MIEYKGYIGK IEYDPEAKIL HGDVINTRDV ITFQGTSVAE IEKAFIDSVD DYINWCREEN 
IEPEKPYSGK FNIRISPELH KKIAINAKSL NLSLNTFVEK ALQHELASTG I