Gene TDE2200 details

Gene Information

• Locus tag: TDE2200
• Symbol: megL
• ID: 2739476
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2237340
• End bp: 2238545
• Gene Length: 1206 bp
• Protein Length: 401 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637161090
• Product: methionine gamma-lyase
• Protein accession: NP_972801
• Protein GI: 42527703
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR01328] methionine gamma-lyase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0407329
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGAA AAGAATTGGA AAAGTTGGGA TTTGCTTCAA AACAGATTCA CGCAGGAAGC 
ATTAAGAACA AGTACGGTGC TTTAGCTACA CCTATTTATC AAACTTCAAC ATTTGCATTT 
GATTCGGCAG AACAAGGCGG CAGAAGATTT GCCTTAGAGG AAGAAGGTTA TATCTACACC 
CGTTTAGGTA ACCCTACGAC TACGGTTGTT GAAGAAAAAC TTGCCTGCCT TGAAAACGGG 
GAAGCCTGTA TGTCCGCGAG CTCCGGTATA GGTGCCGTTA CCTCATGCAT TTGGTCAATT 
GTAAATGCAG GAGACCATAT CGTTGCCGGA AAGACTCTTT ACGGCTGTAC ATTTGCGTTT 
TTAAATCACG GTCTGTCACG ATTCGGTGTT GATGTAACCT TCGTTGATAC CCGTGATCCT 
GAAAACGTTA AAAAAGCTTT AAAACCGAAT ACAAAAATCG TTTATTTGGA AACGCCAGCC 
AACCCGAACA TGTATCTTTG CGACATTGCA GCAGTAAGTA AAATTGCCCA TGCTCATAAT 
CCCGAATGTA AGGTAATAGT AGATAATACT TATATGACTC CCTATCTTCA AAGGCCTCTT 
GATTTAGGTG CAGACGTCGT TCTTCATTCT GCAACAAAAT ACCTAAACGG CCATGGAGAC 
GTTATTGCAG GTTTTGTTGT CGGGAAAAAA GAATTCATCG ATCAGGTACG CTTTGTAGGT 
GTTAAGGATA TGACAGGTTC TACATTAGGT CCATTTGAAG CTTACTTAAT AGGCCGAGGT 
ATGAAGACCC TCGATATCCG AATGGAAAAG CACTGCGCCA ATGCTCAAAA AGTTGCAGAG 
TTCTTGGAAA AACATCCGGC AGTTGAGTCC ATCGCCTTCC CCGGTCTTAA ATCCTTCCCG 
CAATATGAGC TTGCAAAAAA ACAGATGAAA CTTTGCGGAG CTATGATTGC CTTTACCGTT 
AAGGGCGGAT TGGAAGCCGG TAAAACCCTT ATAAACTCGG TTAAATTTGC AACCATTGCA 
GTAAGCTTAG GCGATGCCGA AACCCTTATT CAGCATCCTG CAAGTATGAC CCACTCTCCG 
TATACCCCTG AAGAAAGAGC CGCTTCGGAT ATTGCCGAAG GTTTGGTACG TCTTTCTGTC 
GGTCTTGAAG ATGCGGAAGA TATTATTGCC GATTTAAAAC AAGCCTTGGA TAAACTTGTT 
AAATAA 

 

Protein sequence

MNRKELEKLG FASKQIHAGS IKNKYGALAT PIYQTSTFAF DSAEQGGRRF ALEEEGYIYT 
RLGNPTTTVV EEKLACLENG EACMSASSGI GAVTSCIWSI VNAGDHIVAG KTLYGCTFAF 
LNHGLSRFGV DVTFVDTRDP ENVKKALKPN TKIVYLETPA NPNMYLCDIA AVSKIAHAHN 
PECKVIVDNT YMTPYLQRPL DLGADVVLHS ATKYLNGHGD VIAGFVVGKK EFIDQVRFVG 
VKDMTGSTLG PFEAYLIGRG MKTLDIRMEK HCANAQKVAE FLEKHPAVES IAFPGLKSFP 
QYELAKKQMK LCGAMIAFTV KGGLEAGKTL INSVKFATIA VSLGDAETLI QHPASMTHSP 
YTPEERAASD IAEGLVRLSV GLEDAEDIIA DLKQALDKLV K