| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2165 |
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| Symbol | hypB |
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| ID | 2739151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2197143 |
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| End bp | 2197805 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637161055 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | NP_972766 |
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| Protein GI | 42527668 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.303898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGAGT TTAAGATTAT CGAAATTAAA GAAGGTGTTT ACGAAACAAA TAATGCCCAT
GCAGAAAAGC TGCGTAAGAA GTTAAAAGAA GAAAAAAAGT TTCTTTTAAA TTTGATGTCA
TCTCCGGGTT CGGGAAAGAC GACCTTGCTG AAAGCAAGCA TTGAGGCACT AAAAAAAGAT
TTTAGAATCG GTGTTATGGA AGCCGACCTT GATTCGGCCG TAGATGCCGA AACCATTTCA
CAAACAGGAG CAAAGGTAAT TCAGCTCCAT ACGGGCGGAA TGTGTCACTT GGATGCCGAT
ATGACGGAAC AAGGTTTGGA AGCTCTCGGG ATTGCCGACC TTGATCTTAT CTTCCTTGAA
AATATAGGTA ACCTGATTTG TCCCGCAGAA TTCGATACGG GAGCCTTAAA GAATGTGATG
ATTTTAAGCG TTCCCGAAGG AGACGATAAG CCCTTAAAAT ATCCTCCGAT GTTTCAAGTT
TGCGATGTTC TTTTAATTAC AAAAATGGAC GCCTCAAGCT TTTTTAATTT TAGTCTTGAA
AAATGTACAG GATACGTAAA AAAGCTCAAT CCTAATATAA AGATTTTCCC CGTTTCCGCA
TTAAAAGGGG ACGGAATGGA AGCTTGGATT GAATGGCTGC GTTCTGCCGT AAAAGGGATT
TAA
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| Protein sequence | MQEFKIIEIK EGVYETNNAH AEKLRKKLKE EKKFLLNLMS SPGSGKTTLL KASIEALKKD
FRIGVMEADL DSAVDAETIS QTGAKVIQLH TGGMCHLDAD MTEQGLEALG IADLDLIFLE
NIGNLICPAE FDTGALKNVM ILSVPEGDDK PLKYPPMFQV CDVLLITKMD ASSFFNFSLE
KCTGYVKKLN PNIKIFPVSA LKGDGMEAWI EWLRSAVKGI
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