Gene TDE2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2158 
Symbol 
ID2739144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2191804 
End bp2193312 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content37% 
IMG OID637161048 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_972759 
Protein GI42527661 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0430843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGG CAGTAGAATT AAAAGATGTT TCTTTTATAT ATGAATCCTC AAAAGACGGA 
AGAGCAAATT TAAAAAAGAC TTCTCTTAAT ATCAAAAAAG GAGAATTCTT ACTTGTTACG
GGCATAAGCG GCTGCGGAAA ATCTACGCTG ACAAAATGCA TCAATGGCCT TATTCCTCGG
TTTTACGAAG GAGAATTTTC AGGTTCCGTT TTTATCAATG AAAAAGATAT TTCGAATTTC
AGCATAGATG AAATTTCAAA AGACATAGGC TCGGTTTTTC AGTCTCCCAA GAGTCAGTTT
TTTACCGATG ACGTAATTTC GGAACTCAGC TTTCCTTGCG AAAACTACGG AATTTCCCGC
GATGAAATTA TAGAAAGGAT TGCCGAAGTT TGTTCCATTT TACATATCGA AAATCTTTTA
ACCGAAAAAC TTGAGAGCCT CTCGAACGGG CAAAAACAAA AAATAGCCAT TGCCTCGATT
TTAACCTTGA GGCCTAAGAT TATAGTCCTT GATGAACCCT CGTCCAATCT GGATTTTAAC
TCTATCCTTA TCCTGGCCGA TATTTTAAAA ATTTTAAAAC AAAGAGGTTT TACCGTAATC
ATAGCGGAGC ACCGCCTTCA TTATCTAAAA GATCTTTTTG ACAGAGTTAT CTATATAAAT
GAAGGAAGTA TACAAAACGA ATACACTCGT GAAGAATTTT TAGCCCTTAC AAATACGGAG
TTAAATTCTA AAGGTTTAAG AAGTTTACAT CTTTTTACAA ATGAAAATGA AGCGGAACCC
ATCGGCCCTG TACATAATAA ATTTAACTCC GATACGGAAG CCGAAAAAAT ATGCAGCCTT
TCGGATATTT CGTTTTCGTT TAAGGACGGA ACCGAAATTT TAAACTCGGT TAATTTAGAC
CTTTACAAAA ACGACATTGC CGCCCTTACC GGAAAAAACG GAGCGGGAAA AACAACTCTC
GCAAAAATCA TATCGGGTAT TTACCGCCAA TCTGCCGGAA GCATTAAATT CGGAGAAAAA
ATTTTAAACG AAAAGGAAAG AGTGAGCCGC ACAAATTTTG TTCTTCAAGA TGTTGAATAT
CAGCTTTTCG GTGCCGATGT TTTTTCCGAG CTTTTGATAG GAAACAAACA GCTTGAAAAC
GTAAACGAAA AAATAGAAAA AGCCTTAAAG AAACTCAACC TTTACGATTA TAAAGATGAG
CATCCCTTTT CTCTTTCGAT GGGACAAAAA CAGAGGCTTA TAATAGCGGC CACCTATGTT
CGAGGCTGCC CGCTTACAAT TCTCGATGAA CCGACAAGCG GCTTGGATTA CGGAAATATG
GTCAGGGTAG GAGAACTTAT CGAAGAGATA GCCGAGACTT CGGCAGTGCT TATAATAACC
CATGATTTTG AATTTATCTC GAAGATATGC AACAGGCTGA TTCTTTTAAA GGATAAAAAA
ATAGCCTTAG ATTCAAGGCT TGAAAAAAAC GATAAAAAAC TGGAAAGTAT TTTTTCCACA
TATTTATAA
 
Protein sequence
MNTAVELKDV SFIYESSKDG RANLKKTSLN IKKGEFLLVT GISGCGKSTL TKCINGLIPR 
FYEGEFSGSV FINEKDISNF SIDEISKDIG SVFQSPKSQF FTDDVISELS FPCENYGISR
DEIIERIAEV CSILHIENLL TEKLESLSNG QKQKIAIASI LTLRPKIIVL DEPSSNLDFN
SILILADILK ILKQRGFTVI IAEHRLHYLK DLFDRVIYIN EGSIQNEYTR EEFLALTNTE
LNSKGLRSLH LFTNENEAEP IGPVHNKFNS DTEAEKICSL SDISFSFKDG TEILNSVNLD
LYKNDIAALT GKNGAGKTTL AKIISGIYRQ SAGSIKFGEK ILNEKERVSR TNFVLQDVEY
QLFGADVFSE LLIGNKQLEN VNEKIEKALK KLNLYDYKDE HPFSLSMGQK QRLIIAATYV
RGCPLTILDE PTSGLDYGNM VRVGELIEEI AETSAVLIIT HDFEFISKIC NRLILLKDKK
IALDSRLEKN DKKLESIFST YL