| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2133 |
|---|
| Symbol | |
|---|
| ID | 2739392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2163619 |
|---|
| End bp | 2164413 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637161023 |
|---|
| Product | cobalt transport protein, putative |
|---|
| Protein accession | NP_972734 |
|---|
| Protein GI | 42527636 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACATTT TTAATCGCCC CCCCTTGCCT TTCTCCTCTA AAAGTGCTAT AAAATTAGGA
CTCAAGTCAG GTTATACGAT TATGGAAAGC TTAAAAAAAG CACCTCACAT AACTTTATAT
ATTCTTTTCT TTTTTTTGTT CTATCTTTCG AGCGTTAAGC ATATAGAAGT TTTGATAGTC
TGGGTTTTTA TAGTTATTTC AATGATTTTG ATTTTTTCGC CTGAAAGGAT TAAAAACCTT
AAATCGATTC TGGGCGTTTT GCCCTTTGTG ATAATGGTTC TGCTTCCCTT CGTAATCAGG
GGCTTTTACA ATGTTCCTAT AGAACAAAGA TGTTTTTCTG CAAAGCTCAT CCTGCGGCTA
ATGTGTGCGA TGATGACGAT TTCCTTTATT TCTTCAAAAT ATTCTTACCT TTACTTGGTC
GAAGGCGTTA TGAAGCTCGG CCTTCCCAAT TTTTTAAATC AAATTATTTC TCTTACCTTT
AGATACTTTT TTATGGTAAG AACGGATCTG GACAAGACTG CAAAGGCTAT GAGTGCCCGC
TGTTTTGACA ATGCCCGCAC CTTTGCAAAG GTTTCAACCT ACGGCGAAAT GATAGGCGGC
TTTTTTTTGA AGGCGGCGGA TCACGGCGAT AAGGTTTATA ATGCGATGAG GGCACGGGGC
TTTACCTCCG AAACCAAATT TAAACCCGAA AAAATTGCCT CGCCCTTTTA CATAGGCCTT
CTTGTCTTCT TTGCTTTGTT TTTTATAGGC CTCACAATAA TAGAAAGATT TATGGAGATT
CCATGGCTGT TTTAA
|
|---|
| Protein sequence | MYIFNRPPLP FSSKSAIKLG LKSGYTIMES LKKAPHITLY ILFFFLFYLS SVKHIEVLIV
WVFIVISMIL IFSPERIKNL KSILGVLPFV IMVLLPFVIR GFYNVPIEQR CFSAKLILRL
MCAMMTISFI SSKYSYLYLV EGVMKLGLPN FLNQIISLTF RYFFMVRTDL DKTAKAMSAR
CFDNARTFAK VSTYGEMIGG FFLKAADHGD KVYNAMRARG FTSETKFKPE KIASPFYIGL
LVFFALFFIG LTIIERFMEI PWLF
|
|---|
| |