| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2124 |
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| Symbol | clpA |
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| ID | 2739383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2156466 |
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| End bp | 2158823 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637161014 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpA |
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| Protein accession | NP_972725 |
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| Protein GI | 42527627 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.168971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTA CGGTAAGTCT AACTGTCAGA CGCATTTTTC AAGATGCTGT TGAAGATGCT
AAAAAAAGAA ATCATGAATT TGTTACTCCG GAGCACCTCC TGTGGGCTAT TATGTTCAAT
CCCAAGGCCT TGGAGCTTTT TACCCTTTCA GGTTCGGATT TGGGTTACAT CCACGATAAC
CTAAACACCT ACCTTGAAAA CAAGGTTCCG GTAAGGACAC AAGACAATCA GGCAGAACCT
ATTCAAACAG TAGGCCTGCA AAATGTTTTT GAAAGGGCAA TTTTAAACTG CAACGCTGCA
GAAAAGCCCG TTATCGGGAT TAACGACATA ATAGTAAGCC TTATGGATGA GGAAAAAAAT
CATTGTTCCT TTTTTATGAA GCAAAGCGGA ATAGACCGCC TAAGACTCCT CCAGCTGGTA
AGCAGCCCCG ACTTCTATGA TGACGGCAAA AACCGAAGTG CCTATGAAGA AGCCGAAGAT
GTTCAGGAAG CTCAAGGCGT AAAAGAAGAC TCTGCCCGCC ATAATTCCGA AGAAAAAAAC
ACGGACAAAA GCAAGGCACA AAAAACTTAT CTTGAAAGGT TTACGGTAAA TTTAACCGAA
AAAGCCCGCA AGGGCCGCCT TTCTCCCATA ATCGGAAGGG AAGAAGAAAT AGAAAGAACT
ATTCAGATTT TATGCCGCAA ACAAAAAAAC AATCCCATTC ATGTGGGAGG AGCCGGAGTC
GGAAAAACGG CTATCACCGA GGGGCTTGCA CAAAGAATTA CGGCAAATAA GGTTCCCAGC
TTTTTAAAAA ACGCGAATAT CTACAGCTTA AGCCTATCTG ATTTGCTGGC CGGAGCAAAA
TTTAGAGGCG ACTTTGAAGA GAGGCTTAAA CGGATTGTAT CCGAAATTTC AAGAGAAAAA
AATGCTATTC TTTTTATAGA TGAAATCCAC ACCATTGTAA ATGCAAACTC GGGCGGAGGC
GGAATTGAAG CACCTGATCT TTTAAAACCG ATTTTGGCGA ACGGAAAGGT TCGCTGTATC
GGAGCTACAA CCTTTGAAGA ATACAATAAG CATTTTACAA AGGACGCAGC CCTTGCAAGG
CGTTTCCAAA AAATAGATAT TGAAGAGCCG AATGAAGAAG AAGCCGTTAA AATATTAAAA
GGCCTTCGCG AAAGTTACGA GAATTTTCAT AAGGTTCACT ACAGCGATGA GGTTTTGGAG
TCGGCAGTCC ATCTTTCGGC CATTCATATC AGGGACAGGT TTTTGCCCGA CAAGGCCATA
GACCTTATAG ACGAGGCCGG TGCCCTGATT AAGATAAGAG CCGATAAAGA AAAGAACGAA
AATGAAGCTG ATGAAAAAGG CCTTGAAGAA ACAGCCTTGC CGGAGGTAAG TCTTTCCGAC
ATAGATAAGA TAGTTGCAAA AACGGCAAAA ATACCGGAAC AAAGGGTTTC GGTAAACGAA
ACGGAAAAGC TGCGGCACTT TGAAGAAATC CTTTCAAAAA AAATCTTCGG CCAAGATACC
GCCATCGAGG GCGTTACCAA GGCTGTAAAA CGCTCCCGAG CCGGCTTCCG CTCTAAGGAT
AAGCCGGTTG CAAACTTTTT GTTTGTCGGC CCCACGGGCG TAGGCAAAAC CGAGCTTGCT
AAGACCCTTG CAGAAGAGCT GGGTATCCCC CTCCTCCGCT TCGATATGAG CGAATATCAG
GAAAAGCACA CGGTAAGCCG TCTCATAGGT TCGCCCCCCG GTTATGTAGG TTTTGAAGAA
GGAGGGCTTT TAACCTCTGC CGTACAAAAA AGCCCGAATG CAGTTCTTCT TTTGGACGAG
ATAGAAAAGG CTCATGCCGA CATCTATAAT ATTCTTTTAC AGATTATGGA TTATGCTACC
CTTACCGATA ATCAGGGCAG AAAGGCAGCC TTTAACAATA TAATTCTTAT TATGACAAGC
AATGCAGGCT CTTCCAATAT AGGAAAGCCC TTAATCGGTT TCGGAGGAGA GCGTATTTCG
GAATCGGCTG TCGATGAGGC TGTCGAAAAA ACTTTTACTC CGGAATTCAG AAACAGGCTT
GATGCAATCA TAAAATTCGG CCCCCTTACG ATGCAGGTTA TGAGCCTCAT CATCAAAAAG
GAAGTAGAAA AAATACGCTC CCAGCTCGCC GAAAAAGAAA TTTCCCTTGA GCTTGAAGAC
GACGTTATTC CTCTTTTAGC CGAAAAAGGA TATTCGGAAG AATTCGGAGC CCGCAATGCA
GCCCGTCTTG TCGAAGACGA ATTTGTAACC CCCTTAACAG ACATGATTCT TTTTGGGGAA
ACAAAGAAGG GAAGTTCCGT AAAGTGCCAA ATCGGGGACA AACTTAAAAA GCCCTATTTG
GTGTTAAACA TAAAATAA
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| Protein sequence | MNFTVSLTVR RIFQDAVEDA KKRNHEFVTP EHLLWAIMFN PKALELFTLS GSDLGYIHDN
LNTYLENKVP VRTQDNQAEP IQTVGLQNVF ERAILNCNAA EKPVIGINDI IVSLMDEEKN
HCSFFMKQSG IDRLRLLQLV SSPDFYDDGK NRSAYEEAED VQEAQGVKED SARHNSEEKN
TDKSKAQKTY LERFTVNLTE KARKGRLSPI IGREEEIERT IQILCRKQKN NPIHVGGAGV
GKTAITEGLA QRITANKVPS FLKNANIYSL SLSDLLAGAK FRGDFEERLK RIVSEISREK
NAILFIDEIH TIVNANSGGG GIEAPDLLKP ILANGKVRCI GATTFEEYNK HFTKDAALAR
RFQKIDIEEP NEEEAVKILK GLRESYENFH KVHYSDEVLE SAVHLSAIHI RDRFLPDKAI
DLIDEAGALI KIRADKEKNE NEADEKGLEE TALPEVSLSD IDKIVAKTAK IPEQRVSVNE
TEKLRHFEEI LSKKIFGQDT AIEGVTKAVK RSRAGFRSKD KPVANFLFVG PTGVGKTELA
KTLAEELGIP LLRFDMSEYQ EKHTVSRLIG SPPGYVGFEE GGLLTSAVQK SPNAVLLLDE
IEKAHADIYN ILLQIMDYAT LTDNQGRKAA FNNIILIMTS NAGSSNIGKP LIGFGGERIS
ESAVDEAVEK TFTPEFRNRL DAIIKFGPLT MQVMSLIIKK EVEKIRSQLA EKEISLELED
DVIPLLAEKG YSEEFGARNA ARLVEDEFVT PLTDMILFGE TKKGSSVKCQ IGDKLKKPYL
VLNIK
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