| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2118 |
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| Symbol | |
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| ID | 2739377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2149244 |
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| End bp | 2151355 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637161008 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | NP_972719 |
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| Protein GI | 42527621 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.874859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATA TTGAAAGTCT TTTTAATAAG AATTTTTTGG AATATGCAAG TTATGTTATC
CGCGACAGGG CCATACCCGA CCTTGAGGAC GGCTTAAAGC CTGTTCAAAG GAGAATTTTA
CATTCTCTTT TTGAGATGGA TGACGGCAAA TTTCACAAGG TGGCAAACGT TATCGGGCAC
TGTATGAAGT ACCATCCCCA CGGAGACGCT TCCATAGGAA ACGCCCTCGT GGTTCTTGCC
TCAAAAGAGC TTTTTATAGA TACGCAAGGA AACTTCGGGA ATATTTTTAC CGGAGATGAA
GCTTCCGCTC CCCGATACAT AGAGTGCAGG GTAAACGAAT TTGCAAAAAC CATCTTTTAT
AATCCTCACA TAACCGATTA TACCGTTTCT TATGACGGAA GAAACAAGGA GCCCCTGGCT
TTTAGGGCCA AGCTCCCCGT AATCCTCGCA ATAGGGGCAG AGGGAATTGC CGTAGGTATG
TCTACAAAGA TTTTGCCCCA TAATATCCTC GAAATAATTG AGGCCGAAAA AGCCTTTTTA
AGCGGAAAAT CCTTTGCTCT TTTCCCGGAC TTTCCTACGG GAGGATTGAT AGATGTCTCT
GAATATGAAG ACGGCTTAGG CAAAGTCTTA GTCAGGGCCA AGCTCGACAC CTCCGACGAA
AAGAGGATAG TAATAAGGGA GCTGCCCTTC GGAAGCACCA CCGAAAGCAT GATTAACTCT
ATCGAGGCCG CTTCAAAGGC CGGAAAGGTT AAGATTTCGG AAATAAGCGA CTATACGGGC
GAAAATGTCG AGATTGAGTT AAAGCTTCCC AGAGGAGTCT ATTCGGCAGA TGTGGTAGAT
GCCCTCTATG CTTTTACCGA ATGCGAGCAG TCGATTCCCT GCAATCTTTT GGTTATAAAG
GACAATCTTC CGGTTCAAAT TACCGTAACC GATATAATAA AATATCATGC CAAGCAGCTG
ATGCAGATTT TAAAGGACGA GCTCGAATAC GAAAGAGCTA TGCTTACCGA GCGCCTCCAC
CTGCGCACCC TTGAGCGTAT TTTTATCGAG GAACGCATAT ACAAAAAGAT AGAAACTATG
AAGACGGCGG AGGGCGTAAT CAATGCAGTT ATCAAGGGCT TTGTTCCCTT TAAAAAGGAA
TTAATCCGCG ATGTAACCGA AGATGATGTC GATAAATTGC TTAAAATCCC CATCCGCCGC
ATATCTCTTT ACGATATAAA CAAAAACCGT GAAGAGGTCA GGGAGATAAA TAACCGCTTA
AAGGAAATTG CAAAGCTCTT AAAGAATTTA AAGGGCTATG CTATTTCGGT TTTGGACGGA
ATTGCGGCAA AGCTTCCGGC AGAGGAATTT AAGCGCAAGA CCGAGATTAC GGGCTTTACA
AAGGTTGACG TAAAAGAGGC CGTAACAAGG GATACGGCCC TCCGCTATGA TGAAGAAACG
GGATATCTCG GCACCTCCGT TACCACAGGA AAAGATATTC TACGGGTCAG CCCCTATGAC
CGCATCTTTG TCTTGCGGAA GAGCGGGGTT TACACCGTAA TGGATGTGCC CGACCGAGTC
TTTGTCGATA CGGGAATGTG GTATTGCGGC TTTGCCGAAA AAGAAGAGCT TTCAAAGGTG
CTTTTTACCG TAATTTACCG CGATTCCAAG ACAAAGTATG CCTATATAAA AAGGGCGAGG
GTAGAAGGCT ATATCCTAAA CAGGGATTAC CTTTTTGCTC CCGACAACAC CGAGGTGCTT
TTTGTAAGTA CGAAACTTAA GTTTTCTTTT AAGCTGAACT ATGCGCCTAA ACCGAGAGTA
AAAAAGATAG AAGAAGAATT TAAGGCCGAT TCCTTTGCTG AGAAAGGCTT AAAGGCCCAA
GGCGTACGCC TTTCGGTACG AGAGGTTCTT TCTGCCGAAG AACTGTCTGA AAAAAAATCA
TTGATTAAAA AGGCTCAAGA AAAAAAAGCC GAAACAAAAA AGACGGTTAA AAAGGAAGCT
CCTATAAAGG AAAAAAAAGA AGCCGCAAAG AAGGCTAAGC CTGAAAAAAC GTCCAAGACC
GTCAAAAACG AGAAGACTTC CGGGGCTCAA AAGACTTCAA AGACAGGAAA GAAAAAAGTA
TCCGATAAAT AA
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| Protein sequence | MDYIESLFNK NFLEYASYVI RDRAIPDLED GLKPVQRRIL HSLFEMDDGK FHKVANVIGH
CMKYHPHGDA SIGNALVVLA SKELFIDTQG NFGNIFTGDE ASAPRYIECR VNEFAKTIFY
NPHITDYTVS YDGRNKEPLA FRAKLPVILA IGAEGIAVGM STKILPHNIL EIIEAEKAFL
SGKSFALFPD FPTGGLIDVS EYEDGLGKVL VRAKLDTSDE KRIVIRELPF GSTTESMINS
IEAASKAGKV KISEISDYTG ENVEIELKLP RGVYSADVVD ALYAFTECEQ SIPCNLLVIK
DNLPVQITVT DIIKYHAKQL MQILKDELEY ERAMLTERLH LRTLERIFIE ERIYKKIETM
KTAEGVINAV IKGFVPFKKE LIRDVTEDDV DKLLKIPIRR ISLYDINKNR EEVREINNRL
KEIAKLLKNL KGYAISVLDG IAAKLPAEEF KRKTEITGFT KVDVKEAVTR DTALRYDEET
GYLGTSVTTG KDILRVSPYD RIFVLRKSGV YTVMDVPDRV FVDTGMWYCG FAEKEELSKV
LFTVIYRDSK TKYAYIKRAR VEGYILNRDY LFAPDNTEVL FVSTKLKFSF KLNYAPKPRV
KKIEEEFKAD SFAEKGLKAQ GVRLSVREVL SAEELSEKKS LIKKAQEKKA ETKKTVKKEA
PIKEKKEAAK KAKPEKTSKT VKNEKTSGAQ KTSKTGKKKV SDK
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