Gene TDE2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2093 
Symbol 
ID2740332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2120560 
End bp2121093 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content40% 
IMG OID637160983 
Producthypothetical protein 
Protein accessionNP_972694 
Protein GI42527596 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.16533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG CAAGTGCCGA AATTCTGGAT AAATTGATAA AGCCTGTTTC ATCGATTACC 
GGCTCCCATC ATGAGGGCTT TTTACTGACT GCAGGATGCG GAACTGAGCG TGAACAATGG
AATACAATGA CTGCAGGTTG GGGATCTATA GGCTTTTTAT GGAATAAACT GACTGCTACC
GTTTATGTAA GACCTACCAG ATATACTTCC GAATTTATCG ATAAAGAAGA TTATATAACT
CTTTCTTTTT TTGACAAAAA TGATCCATGG GCTCGGAATG CGTTGGCTTT TTGCGGCTCC
GTTTCGGGAC GAAATGTAGA TAAGGCAAGG GAAACCGGCT TAAAGCCCGT GATGCTTGAT
GACGGTGTTA TAGCTTTTGA GCAGGCTAAG GTTGTGCTTT CATGCCGCAA GTTATACCGA
AGCGAATTCG ATATGGATTT ATTTGTGGAC CCGCAGATTA TTATAGATTC ATATCCAAAA
AAAGATTTTC ATTATGTTTA TATTTGCGAG ATAGTTTCCG TTTATACAAA ATAA
 
Protein sequence
MQKASAEILD KLIKPVSSIT GSHHEGFLLT AGCGTEREQW NTMTAGWGSI GFLWNKLTAT 
VYVRPTRYTS EFIDKEDYIT LSFFDKNDPW ARNALAFCGS VSGRNVDKAR ETGLKPVMLD
DGVIAFEQAK VVLSCRKLYR SEFDMDLFVD PQIIIDSYPK KDFHYVYICE IVSVYTK