| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2092 |
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| Symbol | |
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| ID | 2740331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2119703 |
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| End bp | 2120542 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637160982 |
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| Product | amino acid ABC transporter, amino acid-binding protein, putative |
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| Protein accession | NP_972693 |
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| Protein GI | 42527595 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.514591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA ATCCCAATCA TATTTTTAAA CTTAGTTTTC TCTTTTTATT TACGGTATTA
GTTATGATAT CTTGTAAACC CAAGGCCGTC CGTATCCAAA AAAAAGAAAA CGATATTTCT
CTTGCAAAAA TTCTTGTAAA AAAAGAATTA ATAATAGGTA TAAGAGATGA CCATCCTCCT
TTTTCCGTTC TAAACCTTTT TACGACAAAA ATGGAGGGCT ATGACATTGA AGTAGCTCAA
GAGCTGTGTA ATCGGATGAA GATAAAGCCG ATTTTTAAAG TAATTAAGTG GAATCAAAGA
GAAAGTTTAC TTAAGGATGG AGAAATCGAC TGTATATGGA GTGCCTTTGT ATACAGTAAG
GAAAGTGATG TAGTTTATTC TCTTACCTCA CCTTATATAA AGAGTGCTAT AATATTGGTT
GTAAAGGATA AGTCGCCTTA TTATTCCATT CAAGACATAA GGGAAAAGAA AATAGGTATT
ACCTCCTCAT CATTTATACA GGAAAGTTTA AAAAAAGCCG AATCTAGTCT CGGAGTATTT
ACGAATACGG TTGTGTTTCA GAATGCTCAA GAAGCTATAA ATGCTCTTGA AAAGGATGAG
GTAGAATGTG TAGTATACGA CCTTCTTTCA ATTAACAACC TAATACAAAC AAGAAAAGGC
TCTTACCGAG TGCTGGATGA AGCCATAGCT TATGAAGAAT ATGTTATAGC CTTTCGAAAA
GAAGACATTG CCCTGAAGAA TGCAGTCGAA TCGACTCTGG AAGAGATGGC TAAAACCGAT
TTTTTAGAAA AAACTAGTAA AAAATGGTTC GGTGCAAATA TATCCATTAT AGGCCGTTAA
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| Protein sequence | MKKNPNHIFK LSFLFLFTVL VMISCKPKAV RIQKKENDIS LAKILVKKEL IIGIRDDHPP
FSVLNLFTTK MEGYDIEVAQ ELCNRMKIKP IFKVIKWNQR ESLLKDGEID CIWSAFVYSK
ESDVVYSLTS PYIKSAIILV VKDKSPYYSI QDIREKKIGI TSSSFIQESL KKAESSLGVF
TNTVVFQNAQ EAINALEKDE VECVVYDLLS INNLIQTRKG SYRVLDEAIA YEEYVIAFRK
EDIALKNAVE STLEEMAKTD FLEKTSKKWF GANISIIGR
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