Gene TDE2085 details

Gene Information

• Locus tag: TDE2085
• Symbol: pyrH
• ID: 2741212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 2114322
• End bp: 2115017
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637160975
• Product: uridylate kinase
• Protein accession: NP_972686
• Protein GI: 42527588
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0528] Uridylate kinase
• TIGRFAM ID: [TIGR02076] uridylate kinase, putative

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00820156
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAACTG TTTTGTCGGT AGGAGGCTCT ATAGTAGCCC CGGATAAACC GGATTTCGAT 
TTTTTAGATA AATTTTCAAA AACTATCAGA AATTGGCTTT TGCAAGATTC ATCGCGAAAA 
ATTATTATGG TAATCGGGGG CGGTGCTCCT GCCAGAGATT ATCAAAATGC ATATAGGAAA 
GTTTGTGACC TAAGAAAGGC GCCTGCCAAA AATGATGAAG CGGATTGGAT AGGAATAATG 
GCAACAAGGC TCAACGCCCA GCTTGTAAAG GCTGTGTTTG AAGATCTTTG CCCCAACCCT 
GTCGTTTACG ACCCGACAAC AGTAGATATG TTCGGCGGGC AAATACTGGT TGCTGCAGGC 
TGGAAACCCG GCTTTTCTAC GGATAATGAT GCCGTAGTCC TTGCAGAAAG ATTTTCGGGA 
AATTTGGTAG TAAATCTTTC AAACATTGCC AAAGTCTATA CCGACGATCC TAAAAAGAAT 
CCTGAAGCAA GGCCCATCGA TTCAATATCT TGGGAAGATT TTATAAAAAT AGTCGGAACG 
GAATGGGTAC CCGGAAAAAA CACCCCCTTT GACCCCATAG CCAGCCAAAG AGCTCAAAAA 
GCAGGCATAA AAGTAATATG CGCTGCCGGA AAAGATATTG AGAATTTGGA AAATATTCTC 
AACGGTAAAG ATTTTAAAGG AACGGTAATC GGCTAA 

 

Protein sequence

MVTVLSVGGS IVAPDKPDFD FLDKFSKTIR NWLLQDSSRK IIMVIGGGAP ARDYQNAYRK 
VCDLRKAPAK NDEADWIGIM ATRLNAQLVK AVFEDLCPNP VVYDPTTVDM FGGQILVAAG 
WKPGFSTDND AVVLAERFSG NLVVNLSNIA KVYTDDPKKN PEARPIDSIS WEDFIKIVGT 
EWVPGKNTPF DPIASQRAQK AGIKVICAAG KDIENLENIL NGKDFKGTVI G