| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2084 |
|---|
| Symbol | |
|---|
| ID | 2741211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 2113534 |
|---|
| End bp | 2114289 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637160974 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | NP_972685 |
|---|
| Protein GI | 42527587 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0672832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTG AAAAAACAAT TATTCTTTGC CGGCCGGAAA CAAGTGCAAA CATAGGAGCC
GTATGCAGAG TTATGGCAAA TACCGGTTTT AGCGATTTAA GAATTACGGG AACCAAGGAG
GATTACGATG AAACGGAAGT CTTAAAACTG GCCCTTCACG CCTCCCATGT GTGGAAAAAA
GCTCGTTTTT ACCCTCCTAC CATTGAAGGC CTAAAAGAAG CCGCGTCGGA TTGTTCTGTT
TTAATAGGAA CCAGCAGACG TACAGGCCAT AAACGTAAAG ATCTGGGCAT GAGCCCCGAA
GACCTCTGTC TTGATTTAAA AAAATTCTAC GGAGGCAGAT TAGGCCTCGT TTTTGGCAAT
GAACGCACCG GTCTTATAGA TGAAGAGCTT AATATATGCT CTTTTTCCGT TAATATTCCT
GCTGAAGAAG ACTTCGGCTC CTATAATCTT TCCCATGCCG TGCTTATTCT TTGCTACTCC
CTGTATATAG CGGAAAAAAA TAATCCGCTG ACAGAAAAGG ATAATCCAAG CATAGAAAAA
AACATTTACC TACAAAAAGC TTCAATGAAA ATGATTCAAG AAAACTCGGA ACAGATATGC
AACTACCTTT CGGGCTTAGG ACTATTTAAA AAAGGAGGAA AAAAAACAAA CGAGACATTT
TTTATTGAAC TTTTATCCTC CGCAGGAGCC TCGGAATTCG ATATAATGCA TTTAACTGAA
ATTTTTAAGA AACTTTTTTT TATGTATAGT TGTTAA
|
|---|
| Protein sequence | MNFEKTIILC RPETSANIGA VCRVMANTGF SDLRITGTKE DYDETEVLKL ALHASHVWKK
ARFYPPTIEG LKEAASDCSV LIGTSRRTGH KRKDLGMSPE DLCLDLKKFY GGRLGLVFGN
ERTGLIDEEL NICSFSVNIP AEEDFGSYNL SHAVLILCYS LYIAEKNNPL TEKDNPSIEK
NIYLQKASMK MIQENSEQIC NYLSGLGLFK KGGKKTNETF FIELLSSAGA SEFDIMHLTE
IFKKLFFMYS C
|
|---|
| |