| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2052 |
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| Symbol | |
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| ID | 2740646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2080542 |
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| End bp | 2081744 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160943 |
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| Product | aminotransferase, class V |
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| Protein accession | NP_972654 |
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| Protein GI | 42527556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.131609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACAAAA ACGATTTTCC ATTGCTTATG CAAAATCCTA ACATTCATTA TTTGGATTCG
GCGGCAACGG CACAAAGGCC TATGCCGGTT ATAGAAGGCA TAAAAGAATA TTTTTTACAG
TCAAACGGAA ATGCGGGCCG AGGCTCTCAT TCCCTTGCAA TAGCCTCTTC CATATTGGTT
GAAGAAACAC GAAAAAAAAC AGCCGAGTTT ATCGGAGCCG ATAAAATTGA AAGCATTATC
TTTACAAAAA ATTCTACCGA GGCTCTCAAT ATAATTGCCT ATTGTTACGG CTTATCGAAT
CTTAAAACCG GAGATGAAAT TCTATTGGCG GTATCAAACC ATCATGCAAA CCTCGTACCT
TGGCAGTTTG TTGCAAAACA AACGGGGGCT GCCGTAAAAT TTATCTATCT TAACAAAAAC
GGCACCTTGG ATATAAATGA CTTTAAGGCT AAACTTTCCT CTAAAACAAA GGTGGTCGCC
ATCTCAAGCG TGGTAAATGC TACAGGAATT ATAAACCCTG TAGAAGAGGT AATAAAACTA
AGCCATGAGA GCGGAGCCGT TGTTGTAGTC GATGCAGCCC AAGCCATTGC TCACTACAAG
CAGGACGTAT CAGCCCTTGA CTGCGACTTT TTAGTTTTTT CGGGACACAA GATTTTTTCG
GACTTCGGTG TCGGGGTTCT TTACGGAAAA AAAGAGCTCT TGGACAAGAT GCCGCCTTTT
TTATACGGCG GAGATATGAT CAACTTTGTT ACAGAAGAAT CAAGCGAGTT TAAGGAAGCT
CCCTATAAAT ACGAAGGCGG AACCCACGAT ACAGCTGCCA TAGTTTCTCT TAAACACGCA
ATAGAATATA TCGAAAAAAT CGGTTATGCC AATATAGAAA AAACCGTAAA AGAATTGGAC
TCTTATGCTC TTTCCGAATT AAAAAAACTT GACTTTGTAG AAACCTACGG CACCGATGCT
GAAAAGAGAG CGGGTATAAT CGCCTTCAAT GTAAAAGACG TGCACTCGCA TGACACATCC
TACATCTTAA ACGAATACGG TGTTATGGTT CGAAGCGGAC ATCATTGTAC TCAGCCTCTG
ATGGCTTACC TAAATATAAA TTCCTGCTGC CGTGCAAGTT TTTCTATTTT TAACACCAAG
GAAGACATAG ACGTCATGAT CACAGCCTTA AAAAAAGTAA AAAGCGTTTT TTTAAAGGAT
TAA
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| Protein sequence | MYKNDFPLLM QNPNIHYLDS AATAQRPMPV IEGIKEYFLQ SNGNAGRGSH SLAIASSILV
EETRKKTAEF IGADKIESII FTKNSTEALN IIAYCYGLSN LKTGDEILLA VSNHHANLVP
WQFVAKQTGA AVKFIYLNKN GTLDINDFKA KLSSKTKVVA ISSVVNATGI INPVEEVIKL
SHESGAVVVV DAAQAIAHYK QDVSALDCDF LVFSGHKIFS DFGVGVLYGK KELLDKMPPF
LYGGDMINFV TEESSEFKEA PYKYEGGTHD TAAIVSLKHA IEYIEKIGYA NIEKTVKELD
SYALSELKKL DFVETYGTDA EKRAGIIAFN VKDVHSHDTS YILNEYGVMV RSGHHCTQPL
MAYLNINSCC RASFSIFNTK EDIDVMITAL KKVKSVFLKD
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