Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1983 |
Symbol | |
ID | 2740436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1993466 |
End bp | 1996429 |
Gene Length | 2964 bp |
Protein Length | 987 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637160873 |
Product | hypothetical protein |
Protein accession | NP_972586 |
Protein GI | 42527488 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTTTAGAGAT TTTAATAATT TCAGCGGTAT TGCTGACAAC GGCCATTGTA TTTACAAGCT GTAAACAATT TATAGACAAT CCTGAAGAAT TCTTAGGTTA CTGGTCGAGC GAAGTCGTTC CTACAGGATT CAGTATTGAT AAGCCCTATC AAATAAGTAA TGACGGAGCA CTGTGCATAC CGTCGGATTC GCCTGTAACG ACGCTTACGA TTAAACTGCA TAACCCGAGA AAATTCAGCT TAATTACGCC TACATCAATG TCCTCAGCAG CAGACGTGCA GAAGATTATA AATTTTCCCG GGCTTTTAAC ACAGCCGGCA TACAACACGG ACTACACTTT AGAGCAGACA CCTGACAAAA CGGCATTGAA GCTCACGTAC AATTCAGCCT TTTTAAAAAA TCACGAGTGG GGTACGGGTA ACATAAGCCC CGAAATTACC CTCACTTCCA CAGACGGTAG ACCATTCAAT AAGAAGTTCA GTCTGAACCT AAAGGCGGAC ACAGCGCCTA AACTCAGTTC TTCCATAACA ATCGGTAAAA CGGCAAACCC TATAGGCGGT AAGTATTATT ACGTTATTAT ACTGAAAGCC GAAGATATGG CCGAAACGGC GGGTACCGGA TCTTCTGCCG GAAAGCGACA GAAGGACATT GAAGAGCTGT CCGTAACAGG TGGTGATTCG GCTGCGATAG CGTTTACATC GGGAAATACA GCCTTTGAAC CAAGCGGCCG ACTGCTTGCT TCAACCGAAG TTGTTCATCT TTCAGGTGAT GAGACTTCGC CGGCAGTTCC CTCATGGAAT CCTGCTCTCA ATAACGATTC TTGGGCATTG CGTTATAGAA CGGATACGGA AGTAAAGACT GCAAGAAAAA ACTATACATT CACTCTCATA GATGAAGCAG GCTTAAAATC TTCTGACATT CACGTATCAA CCCCTGCAAC GAAGGCGGAA GCTGCAAAGC TCTCCTATAA TTCAAATGAC ATATCTATAC AAGCCGGTAA CCCAAGCAGT CCGTATCTAA TAAGTACAGA ATCGTCGATT ACAGTTAAGG CAAAAACGGA AACAACCGGT GCAACAATAA GGGGTACACT CTTCAAGAAA GAATCAAGCA CATGGCGATT TCTTAACGAC ATAGACAGCA GCTCTAATAC CGAGGTTGAT ATAATGTTGA CAGCTCCATC TGGTATCGGT TCTGAGATAG AATATCAAAT AAGTCTTACT GTAAAAGAAG AAGGCTTTGC TGATAGCGAT ACAAAAGTTT TTTATGTTAA AGTAAGAAAA GGTACGGTCT TAGAGATTAA TAGCACCGAT AGCGGTGCAT GGACCACGCT TAAAACCGAG GTCGAAAGGT CTAGCGGCGG TCCCGACATA ATCAAAATCA CCGGCAAAAT TAAAGCTCCT TCTGGACCGA ATAACCAAAT TAATGTAAGT CGAACCGTTA AAATAATGGG CTCTAATAAG AATACCGATA TATTGGATGC TGATAATGAA ACCTTTATTT TTAATATGGG GCTACAAGGC GTATTGACTC TTGAAAAGCT GACCCTGCAA AAAGGAAAGA ATACCGATAG TTCCAGAGGT GGCGGTGCAA TCTACTGTGC CGGCGGAGAA TTGACAACAG ATGATATTAT TATCAAAGAC TGTACGGCAA CAAAGAATGG AGGCGGTATT TATGTACACA ACCATGGTAA CATTATCTTG ATAGATACGG AAATAAAGGG TTGTACCGCA GCGGCAGACG GCGGCGGTGT GTATGTGGGT GAAAACGGTA CTTTTAAGAT GCATGGCGGC ACAATTAAGA ATAATACAAG CATTCTGGGA AAAGGCGTTT ATGTACAAGG TTCTACAGGC TATCTCATCT CCGACGGTGA GTTTATCATG GGCGGCGAAG CCTGTGTCGG AGAATGGGGA AACGGTACCC TGCAAGACGG AAATGATGTG TATTTAGATG AGGGTAGTGG TTCTCTTGCT CACATAAAAA TTGACAAAGG TAAGCCTATA ACGAAATCGA AAGCTGCCTG TATTACTCCT GAATCCTATA GTGCCGGCGA AACGGTACTA ATGATGTTGG GCGGCAGTAC GGATGTAGGG GCTTATAATG ATAGGTTCAC CGTAACCCCG GAAGATTCAG GCAGCGGCAA TACGCAGACA TGGTCAATAG ATGATAATGG GCAATTAACA AGATATACGA AAGTACGGTA TGATCAGTTG GAAGCCTTCC TTACTTCGCC TCAGGCTTCG TCAACCGCAA TAAACCGTAT CGAAATAACA GGTGAGATAC CGCAAAATCA CTTTGATGGC AGCAGCTCGG GTTCCGGAGA ACTCAACAAA AGGATAAAAA AAGCCGGCTC TAAAAAACTT GCGCTTAAAC TGCCCGCCGG CATTTCAGAC GTTACTTCGA TGGAAAATTG TTTTGCAGGG TGTGGCAACC TTGTTTCTCT GGAGAACATT CCTTCAGGCG TTACAAATAT GAAGAACTGT TTTTTGAACT GCACCGGTTT AACCACAGCT CCATCTATTC CTGATGGTGT TATGAATATG GAGGGTTGTT TTAGAGGATG TAACAAATTA ATCACAGCTC CTACTATTCC TGATAGTGTT AAGAATATGA AAGAATGTTT TTTGAACTGT ACCGGTTTAA CCACAATTCC TGGTATTTCG AATAGTGTTA CGGATATGGA GAGCTGTTTT AGAGGATGTA AAGAATTAAC GACCGGTCCA GATATTCCCT CAAGCGTTAC GAATATGAAT AATTGTTTTT TGAACTGTAT AAAGTTGAAA GGAGTAAAAA TTAATCGTGA TTATTATGGC TGCAATTTTG CCGATGCTTT TCACGGCTGC TCTGGCTTGA ATGCAGGGGG AATAAAGGTT CCTTCAATTT ATCTTCAAAA CTATAAGGAT AATGCGGGCA CTATGGGAAC AAGTGCTAAT AAGTTTTCTG CAATAACACC TTAA
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Protein sequence | MKKILEILII SAVLLTTAIV FTSCKQFIDN PEEFLGYWSS EVVPTGFSID KPYQISNDGA LCIPSDSPVT TLTIKLHNPR KFSLITPTSM SSAADVQKII NFPGLLTQPA YNTDYTLEQT PDKTALKLTY NSAFLKNHEW GTGNISPEIT LTSTDGRPFN KKFSLNLKAD TAPKLSSSIT IGKTANPIGG KYYYVIILKA EDMAETAGTG SSAGKRQKDI EELSVTGGDS AAIAFTSGNT AFEPSGRLLA STEVVHLSGD ETSPAVPSWN PALNNDSWAL RYRTDTEVKT ARKNYTFTLI DEAGLKSSDI HVSTPATKAE AAKLSYNSND ISIQAGNPSS PYLISTESSI TVKAKTETTG ATIRGTLFKK ESSTWRFLND IDSSSNTEVD IMLTAPSGIG SEIEYQISLT VKEEGFADSD TKVFYVKVRK GTVLEINSTD SGAWTTLKTE VERSSGGPDI IKITGKIKAP SGPNNQINVS RTVKIMGSNK NTDILDADNE TFIFNMGLQG VLTLEKLTLQ KGKNTDSSRG GGAIYCAGGE LTTDDIIIKD CTATKNGGGI YVHNHGNIIL IDTEIKGCTA AADGGGVYVG ENGTFKMHGG TIKNNTSILG KGVYVQGSTG YLISDGEFIM GGEACVGEWG NGTLQDGNDV YLDEGSGSLA HIKIDKGKPI TKSKAACITP ESYSAGETVL MMLGGSTDVG AYNDRFTVTP EDSGSGNTQT WSIDDNGQLT RYTKVRYDQL EAFLTSPQAS STAINRIEIT GEIPQNHFDG SSSGSGELNK RIKKAGSKKL ALKLPAGISD VTSMENCFAG CGNLVSLENI PSGVTNMKNC FLNCTGLTTA PSIPDGVMNM EGCFRGCNKL ITAPTIPDSV KNMKECFLNC TGLTTIPGIS NSVTDMESCF RGCKELTTGP DIPSSVTNMN NCFLNCIKLK GVKINRDYYG CNFADAFHGC SGLNAGGIKV PSIYLQNYKD NAGTMGTSAN KFSAITP
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