| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1958 |
|---|
| Symbol | |
|---|
| ID | 2741521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1972399 |
|---|
| End bp | 1973775 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637160848 |
|---|
| Product | surface protein, putative |
|---|
| Protein accession | NP_972561 |
|---|
| Protein GI | 42527463 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA TAAAAACACT GCTCACAGCA GAAGAGAAAG TAAATTTGCA GTTGCTGGAA
ATAACGGACG GGATGTTAAC AAGAGTAACT GATTCCAATA AGCTCATAGG TAGTCTTGTG
CTGCCGGATA GTGTTGTTGA GATTGGTATG GGGGCATTTT ACTGCTGCAC CGGTTTAACA
AGTGTTAAGA TACCCGATAG TGTTCATAAG ATTGACAAGT GGTCTTTTTT CTCATGTACC
GCCTTAACAA GTGTTGCTAT ATCGAAGAGT GTTACTGAGA TAGGTTCAAT GGTTTTTACA
GGTTGTATCA ACTTAACAAA GCTTACTGTT GATAGTGCAA ATCCTGTCTA TTGTACTGAG
AATAATATTA TTTACACAAA AGATAAGAAA AAACTGATAG CTGCAGCAAG CGGTTTGGAG
CATATTGTGA TACCTGATAG TGTTACCGAT ATTGGCGGAC CATTTTATGA CTGCACTCGT
TTAGCAAATC TGACTGTTGG TAGTGAAAAT ACTGTCTATT ATAGTGAGAA TAATATTATT
TACACAAAAG ATAAGAAAAA ACTGATAGCT GCAGCAAGTG GTTTGGAGTC TGTTGTTATA
CCTGAAGGTG TTACTGAGAT TGGTGAGCAT GCATTTTCCG CCTGTTCCGT TTTAACCGAT
GTCGTCATAC CTAATACTGT TACTGATATT GCTAAGTCTG CATTTTACGG CTGTACTCGT
TTAACAAAGC TTATTGTTGA TATTGAAAAT CCTGTCTATT GTAGTGAGAA TAATATTATT
TATACAAAAG ATAAGAAAAA ACTGATAGCT GTGGCAGGCG GTTTGGAGCA TATTGTTATA
CCTGATACTG TTAGCGATAT TGGCGGATGG GGATTTTTCG ACTGCACTCG TTTAACGCAT
CTTAGTGTTG ATAGTGAAAA TCCTGTTTAT TGTAGTGAAG GCAACATTAT TTACACAAAA
GATAAGAAAA AACTGATAGC TGCAGCAAGC TGTTTGAGGT CTGTTGTTAT AGCTGACGGT
GTTACTGAGA TTCCTTCATG GGGATTTTCC GCCTGTTCCA ATTTAACCGA TGTTGTGATT
CCCGATACTG TTACTGAGAT TGGTGATATG GCATTTTTTG ACTGTAGTTT TTTGACTAAT
GTTATAATAC CTAATAACGT GACGACGATT GGTGATCATG CATTTTCCTA CTGTAGTAAG
CTAAAAACGG TAATCATAGA CTCTGCTGTT GTAACAGATA TCGAAGATAA TGCTTTTGAA
AATGTACATG CCGATGTGCA TTTTACCGTG AAAACCGATA AAGTAAAAGC ATTGTTGAAA
AAGAGCGACA GCAGTATACG GGATGAGCAG ATTACGGTCG TACAAGTTTG TGAATAA
|
|---|
| Protein sequence | MKQIKTLLTA EEKVNLQLLE ITDGMLTRVT DSNKLIGSLV LPDSVVEIGM GAFYCCTGLT
SVKIPDSVHK IDKWSFFSCT ALTSVAISKS VTEIGSMVFT GCINLTKLTV DSANPVYCTE
NNIIYTKDKK KLIAAASGLE HIVIPDSVTD IGGPFYDCTR LANLTVGSEN TVYYSENNII
YTKDKKKLIA AASGLESVVI PEGVTEIGEH AFSACSVLTD VVIPNTVTDI AKSAFYGCTR
LTKLIVDIEN PVYCSENNII YTKDKKKLIA VAGGLEHIVI PDTVSDIGGW GFFDCTRLTH
LSVDSENPVY CSEGNIIYTK DKKKLIAAAS CLRSVVIADG VTEIPSWGFS ACSNLTDVVI
PDTVTEIGDM AFFDCSFLTN VIIPNNVTTI GDHAFSYCSK LKTVIIDSAV VTDIEDNAFE
NVHADVHFTV KTDKVKALLK KSDSSIRDEQ ITVVQVCE
|
|---|
| |