Gene TDE1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1928 
Symbol 
ID2740168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1945888 
End bp1946643 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content37% 
IMG OID637160815 
Producthypothetical protein 
Protein accessionNP_972531 
Protein GI42527433 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA AGCTGATTAA GGCCGTTAGG ACAATCGCTG ATTTTGATCT TAATCTTTTT 
AATGAGCTTA ATTTAGGACT TGAACTTCAA GATTTTACCG AGCCCTGTTT AACCGACTCG
GAGATATACT CTCTTTTAAA CGAATACGAA AAAAAGCTGC CCTCTTTAAA AGGAATAAAA
TCCATGCACG GCAGCTTTAT CGATTTAAAT ATAGCTTCTT TTAATAGGGA CATAGCCGCT
TACAGCAGAA AAATGTACAA GAGGGATTTA TTTTTTGCAA AGCTCTTGAA CCTTGATTTT
ATAATTTTTC ATACTCAGAT TATGCCTTGG TTTAAGGAAG ATTTTAAATT CGATTTATTT
TTAAAAAGCA ATGCGGAATT TTTTAACGAG GCCGTAGAAA ATTCCGGCTT TAAGGGCTGT
GTGGTTTTAG AAAACGTCTG CGAAAAAGAC AGCAGCCTCA CTGCAAAACT TATAGAAGCC
GTCGCCCTGC CTCAAGTAAA ATTAAACCTC GATTGGGGAC ATGCCCTAAT TTCAGGCGAA
AAAATCGAAA GCTGGTTTTC CAATAATCAA AAACACATAG CCTACATGCA TCTCCATTCC
AATGACGGAA AAAACGATCT ACACAACCCC GTTTCAAAAG AAGACTTTGC AAAGCTGTCC
GACCTGTTAG AAAAATACGG ACTCAACTGT CCCATCTGCT TGGAATATTG GGACATCGAT
ATAAAAAAAG AAATGGAAAG GATATCCTTA TTTTAA
 
Protein sequence
MKNKLIKAVR TIADFDLNLF NELNLGLELQ DFTEPCLTDS EIYSLLNEYE KKLPSLKGIK 
SMHGSFIDLN IASFNRDIAA YSRKMYKRDL FFAKLLNLDF IIFHTQIMPW FKEDFKFDLF
LKSNAEFFNE AVENSGFKGC VVLENVCEKD SSLTAKLIEA VALPQVKLNL DWGHALISGE
KIESWFSNNQ KHIAYMHLHS NDGKNDLHNP VSKEDFAKLS DLLEKYGLNC PICLEYWDID
IKKEMERISL F