Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1860 |
Symbol | |
ID | 2740049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1886292 |
End bp | 1886822 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160747 |
Product | hypothetical protein |
Protein accession | NP_972464 |
Protein GI | 42527366 |
COG category | [S] Function unknown |
COG ID | [COG4709] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0694107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA GAGAATTCAT TGAAGAACTT GAAGACAGGC TTCGGCATCT GCCCTATAAG GATAGAAAGG AAGCAATTAA ATTCTATGAA GAATATTTTG ATGAGGCTGG AAGTGAAAAT GAGCAAACGG TAATAAACGA GCTTAGAAGC CCTGCCCACA TTGCTTCAAA AATCCTTTCG GACTATGCAA TAAAAGAAGC CGAAGGAGCA AGAAAATCTG CAAGGGGAGG TTTAAGAGCC TTATGGTTTA CAATCCTCGG AATCTTTGCA GCTCCGATTG CAATACCGCT GGCTGTAATT CTTACCGTAG TAATAGTTCT TCTATGTGTA GGACTTTGCG TTGCATCCAT TGCCCTTGTT TTCGGCGGCG GTATATTGGC AGTATTCGCA TTCGGTATGC TTTTTGTAGA CTTCGGTACG GGTATTCTTT TAATAGGAGC TATTTTAATA GCCATAGGTT TTACCAGACT TTTATACCTT TTTGTTACTG CGATTATAAG AAAAATATCG CAGCTGGTAA AAAAAATTTA A
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Protein sequence | MKRREFIEEL EDRLRHLPYK DRKEAIKFYE EYFDEAGSEN EQTVINELRS PAHIASKILS DYAIKEAEGA RKSARGGLRA LWFTILGIFA APIAIPLAVI LTVVIVLLCV GLCVASIALV FGGGILAVFA FGMLFVDFGT GILLIGAILI AIGFTRLLYL FVTAIIRKIS QLVKKI
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