| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1851 |
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| Symbol | |
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| ID | 2740040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1879667 |
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| End bp | 1881187 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637160738 |
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| Product | ABC transporter, permease protein, putative |
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| Protein accession | NP_972455 |
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| Protein GI | 42527357 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00637092 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA CAATTTTTAA AATGGCGGTA AAAAATCTTT TTGCGAGTAA AGCAAAGATG
ATTATTACCT TATCGCTTAT AGGAATAGGA ACTTTTTTGG TTATACTTGG TTTCGGTATT
CTAAATTTTT CATTGCAGCA AACTCAAGAG GTTTGTATAA GCGATTTTTC GGGAGATGTT
TTAATTACGG GCAAGCCTGA AAAAGACACT GTAATGGTAC AACTCTTGGG TGTTTTTCAG
ACAGTCAGTG TCAGCATGGA TACACCGAAG ATGCCCTATC TGGTTCCTTT TGAAAAAGTT
AAGTCCAAGG TTGAAAGCCT TCCTGATGTA AAAGGTCTTA CTCCCTCCGT TTTTGCAAGC
GGTATGCTCA AGGCTCTTGA TTTACCCGAT TCATGGGAGG CCGAAGACAA AAACCGGTCT
TTTCTTCCTT ATGCACAGAT TCTAGGAATT GAACCTGAAA GTTATAAAAA TCTTTTTGAT
ACGATTAATA TTTATGAAGG AGAATATCCT AAAACATCAA ACGGTAAGTT TGCTCTGATT
CCGCGTGATT TAAAAGAAAA GTTTGAAAAA TATTATGACA GACCCTTAAA CTTGGGAGAC
GAGATTTTGG TAACGGCCTT TGCAGGAAAG GCAAGACAGC AAAAAGTTAT CATAACGGGC
TTTTTCGATT ATGCTCATCC CGATACGGCA ATAGACGGTA TAGCCTACTT TGATGTAGAT
ACAACCCGAA TACTTGCCGA TATGACAATG GGAGCAAGAG TCGCAGCAGC CATTCCCGAT
TCCGTCGATT TAAGCCTTTC AGAAAAATCG GAAGATGAAC TTTTTGCAGA TGATTCAGGC
GCAGATATTA TAGATACCGT ACAGAATTCA AATTCAAAGA TTGATTATGA AAATCTTTTG
GGAAGTACCG AACTGCGCGA TCGGCTTAAC TTAGCCGACA ATGAAGCTTG GCATCATATC
GTAATAAAGC TTAAAGATTC TTCAAAGACT CAAAGCGTAA TAAAAACCTT AAATGATTGG
TTTAAGGAAG AAGGAATAAG CGCTCGAGCT GTGAATTGGG AACGCGGAAT GGCAATGTAT
TACAGTGCAA TAGAAGGAAC AAGAATTCTT TTTATTACAA TGCTGGCTAT TCTTTCCGTA
GTAGTTTTAA TCGTTATAAT GAATACACTG GTTGTCGCCG TTATGCAAAG AAGCTCCGAG
ATAGGAACGA TGAGGGCCAT AGGAGCTAAA AAAGGTTTTG TAAGAAAGAT ATTTTTTGCG
GAATCTTTTT TTATGTCTTG CGTAGGTGTT CTTATCGGCT TGGTACTTGC TCTTATCGCT
GCAGCCGTTG TGAATGCTTT TGACATCAGG GTCGGAGATA TACTTGCAGC TATGTTCGGC
GGAAAACAGA TTAGGGTAAG TATTTCGATC GGTTCTGCCG TTTGGACAAT GGCTGCAATG
CTTTTAGCAG GTCTTGCAGC AAACTGGTAT CCGGTAAGGC TTGCTTTAAA GATAAGTCCT
CTTGAAGCAA TTAACCGTTA A
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| Protein sequence | MNKTIFKMAV KNLFASKAKM IITLSLIGIG TFLVILGFGI LNFSLQQTQE VCISDFSGDV
LITGKPEKDT VMVQLLGVFQ TVSVSMDTPK MPYLVPFEKV KSKVESLPDV KGLTPSVFAS
GMLKALDLPD SWEAEDKNRS FLPYAQILGI EPESYKNLFD TINIYEGEYP KTSNGKFALI
PRDLKEKFEK YYDRPLNLGD EILVTAFAGK ARQQKVIITG FFDYAHPDTA IDGIAYFDVD
TTRILADMTM GARVAAAIPD SVDLSLSEKS EDELFADDSG ADIIDTVQNS NSKIDYENLL
GSTELRDRLN LADNEAWHHI VIKLKDSSKT QSVIKTLNDW FKEEGISARA VNWERGMAMY
YSAIEGTRIL FITMLAILSV VVLIVIMNTL VVAVMQRSSE IGTMRAIGAK KGFVRKIFFA
ESFFMSCVGV LIGLVLALIA AAVVNAFDIR VGDILAAMFG GKQIRVSISI GSAVWTMAAM
LLAGLAANWY PVRLALKISP LEAINR
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