Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1829 |
Symbol | |
ID | 2740491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1862457 |
End bp | 1863737 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637160716 |
Product | hypothetical protein |
Protein accession | NP_972433 |
Protein GI | 42527335 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA ATCAATGTAA ATTAATTAAG ATGTTAAGTG CTTCCTTAAT ATTTTTTTGT TTTTTCAGCG GCATATTTGC ACAGAATGAA GCTGAATGTG AAAAAGCCGT CCAAGCGGTT GCGGAAGCTT GTAACGAAAA ATCCGTAACG AATGTGCTGC CTTATTTGGC TGAAGATTTT TCAATTGCAG GACAGAGCGG TAATAGGGCA AAAGCAATTT TACAGCAATT ATTGGCCGGA GTGGGGACGG TAATTTCCTA TGAAAAAACA GAAAGCTTTA TGGAAGACGG AAAACTTATT TTAAAATACT CAATTGAATA TTCTCAAGTA GGAAAGAAAG AGTCCGTATT TATTTTCAAT AAGGATAATT TAATTGTCGA AGCTGAACTT ATGAAAATAA AAGTAAAAAC TTTGTCTTCA GAAGAACGAA CTATAGAGTA CAATACAAAT AAAATCACTT CCATTCCTTT TATATTTGCA GGAAATCTGC CGTTGGTAGA CGTATTGCTT GAAGGTGAAA GCAGATTGTT TTTATTAGAC AGCGGTGCTC CTTTTTCCAT TTTAAATTCA AAGTACATTG AAGGATTAAA CACGGGCACA AAAAAACTTG GTAGTTTTCA GGATGTCAGC GGTAATGTTT CAAGTCCGAA TATGGATATA ACAAACGTAA AAGAATTGGA ATTCGCCGGT AGTAAAATAA AAAATCAAAA AATAGTAGTT CTTGATATGA CTCGTCTTGA ACAGAGTTTA AAAACGGACG GCATATACGG ATTAATAGGC TATGATATGT TAAAAGAATA TGATGTCTTT TTAGATTATC AAAAAAAGCA GTTGACACTT ATAAGACCGG ATTCGTATGA TAGTTTTATA AAAGCTAATA CATTAAAAGT AGATTCAAAA ATTCCGTGTA AAATGGCAGG TCATATTCCG GCTATTGAAG TATCGATTGG AAACAAAATC TATAAATTGG GGCTCGATAC CGGAGCTGAA TTCAATTTAC TCGACAGCTT TTATTTTAAT GAATTAGAAC CGTCCTTAAC AAACAAAGAA AAAACCGAAC TGAGCGGGGC AGGCGGAATT AAACAGGAAA TATATCAAGC GGAATTAAAA ACAATGAAGA TAGGCGGTAA AACATATAAA AATGTAAAAA CCGTATTTTC CGATATTTCT CATTTACGAA AAAAGCCCGA TAGTTATGAC GGACTTTTAG GCTATCCGTT TTTCTCCGCC CAACCGACTC TTATAAGCTA TAAACGGGGA GAAATTATTT TGTTTAAATA A
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Protein sequence | MKQNQCKLIK MLSASLIFFC FFSGIFAQNE AECEKAVQAV AEACNEKSVT NVLPYLAEDF SIAGQSGNRA KAILQQLLAG VGTVISYEKT ESFMEDGKLI LKYSIEYSQV GKKESVFIFN KDNLIVEAEL MKIKVKTLSS EERTIEYNTN KITSIPFIFA GNLPLVDVLL EGESRLFLLD SGAPFSILNS KYIEGLNTGT KKLGSFQDVS GNVSSPNMDI TNVKELEFAG SKIKNQKIVV LDMTRLEQSL KTDGIYGLIG YDMLKEYDVF LDYQKKQLTL IRPDSYDSFI KANTLKVDSK IPCKMAGHIP AIEVSIGNKI YKLGLDTGAE FNLLDSFYFN ELEPSLTNKE KTELSGAGGI KQEIYQAELK TMKIGGKTYK NVKTVFSDIS HLRKKPDSYD GLLGYPFFSA QPTLISYKRG EIILFK
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