Gene TDE1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1805 
Symbol 
ID2739235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1842125 
End bp1842946 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content29% 
IMG OID637160692 
Productradical SAM domain-containing protein 
Protein accessionNP_972409 
Protein GI42527311 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.644596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAATT CAAAACAATT TTTGCGAACA GTGAATTGGC ATTTTGTTAA TAGTTGTAAT 
ATGTCATGTA AATACTGTTT TGTTTCTTGC TGTAAGGAAC TTCCGCTTGA AGAATCCATA
AGTGTTCTTG AAAAATTAAA AGGGCATTTT GATCGGATTA ATTTTGTTGG TGGTGAGCCG
ACTGTTTCAT CCAAACTTAT TCCTCTTGTA AAAAAAGCAA AAGAATATGG TTTTATTGTG
TCTATGGTTA CAAATGGATT CAATTTATAT CATAAACCTG AAACTTTTGA CGAAATTCTT
ACTGATTTTA GTATTATAGG TATCAGTATT GATTCTTTAA ATGAAAATAC AAATGTATTG
ATTGGTAGGT CTGTGAAAAA TAGTGTTTTA TCTAGGGATG ATTATATAGA TCTGTGTAAA
AAAATAAAAC TTGCAGGCTG TAAATTAAAA ATAAATACAG TTGTAAGCAG AGTAAATTTA
GATGAAAACT TTAATGATTT TTATGAAACT GTTATGCCTG ATAGAATAAA ATTACTTCAG
GTTCTAAGAC CTGCCGGAAG ATTAAAACAA GATTATACGG ATTTCTTGAT AGAGGAAGAT
GATTATTTAG AGTTTGTTCA ACGGCATCAT AAGTTTTCTG AAGTAATATG TAGTGAGAAT
AATGAATTAA TGTTGAACTC ATATTATATC TTAAATAGTG ATGCTTGCTT TCTTGATAAT
AAATCTGGTT GTATAAGCGG TTCTTTGTTG GAAAATGATT TAAAGTCGGT ATTAAAAAAT
GTTTATGTCG ATGAGAATAA ATATAGAGCC AGATATGCAT AA
 
Protein sequence
MYNSKQFLRT VNWHFVNSCN MSCKYCFVSC CKELPLEESI SVLEKLKGHF DRINFVGGEP 
TVSSKLIPLV KKAKEYGFIV SMVTNGFNLY HKPETFDEIL TDFSIIGISI DSLNENTNVL
IGRSVKNSVL SRDDYIDLCK KIKLAGCKLK INTVVSRVNL DENFNDFYET VMPDRIKLLQ
VLRPAGRLKQ DYTDFLIEED DYLEFVQRHH KFSEVICSEN NELMLNSYYI LNSDACFLDN
KSGCISGSLL ENDLKSVLKN VYVDENKYRA RYA