| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1741 |
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| Symbol | |
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| ID | 2739199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1792932 |
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| End bp | 1795472 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637160625 |
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| Product | penicillin-binding protein |
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| Protein accession | NP_972345 |
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| Protein GI | 42527247 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.213477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGC TGAGCAAAAT AGTATATCTA TACCTTATTT TGATTTTCTT GATCCTAGCC
GGAGGAGCCT TTGCCCTAGG AAAAATGATG GCAATGACGG AAAATATAAA ACAAAGCGAA
TTATTTGTCG ACTTTAATCC GGCCCTGCCG TCAAGAATAT TGGATATCAG GGGAGATCTC
ATCACCGAAT TCTCATTAGA CGAAAAGCGA GAGCTCATAA ATTACGGAGA CATTTCGCCC
AACCTGATTG CAGCTCTTTT AGCCCGTGAA GACCGCCTAT TCTATGAACA CAAGGGTTTT
AGAATAAAAT CGATTATCAG GGCTATCATA GGACAACTTA CAAGAAGATC ATTAGGAGGC
GGAAGTACAA TTACTCAGCA AATCGCAGGT ATTCTCTATT GCGACAGAAC CGATAAAAGC
GTAAAAAGAA AGATAAAAGA ACTTTGGTGG GCTATCCAGA TGGAAAGACG ACACTCAAAA
GACGAGATAA TGATGCTCTA CCTAAATGAA GCCTACTTTG GGGGCGGAAC AAGCGGAGTA
AGTGCGGCAT CACGCTTTTA TTTCGGGCAT TCAGCCTCTG AACTTACACC TGCAGAAGCA
GCCATCTTAA TCATTCAGCT TTCAAACCCT ACAAGATACA ATCCTTTTAA TTACCCGAAC
AGAGCAAAGG AAAGACAGGA AAATGTTCTT GAAGGGATGA TAAACCTCGG CTTTATATCA
AAGAAAGAGG CGGCGGAATC TTTTGAAGAC TATTGGGCTA ACTTTGACTA TACCCGAATT
GCCCTATCGG CATGGCTTAC CCGCGAAGAT AAGGCCAGAT GGTTTTCGGA ATATGTAAGG
CGAGAAGTGG CCGACAATAT GCTATACGGC ACTATGAACC TTTATAAGGA CGGATATACC
GTACATACGA CCTGTGATTT AAGGCATCAA GAAATAGCCG ATAGAGAGTT TCAAAAATAC
ATTGCAATAG CCAATGACAG GGTTTCGGCC TCAACCTCCA CATCATTCAG TCAGGCGGAA
CAATACAGCA ACCTGACAGC CCTTTTAACC CTTTGCTTCG GAATAGAATC CCTAAGCGTG
GGAGAAAAAC AGCTCAAGGT AAAAACTAAT TCTTATTATC AAAACAAGCT GAACAGTACC
ATTGATGTAC TCGCCCTAAT GTGCGGTATA GACAACCTAA AAACTCTTAC CAAACAATCG
ACAGCTAAAA TGCAGGAAGT ATTGATGGAA AGGGTGGTAG AAGGTACCTT TATCTCCATC
GAAAATGAAA CAGGATATAT AACGGCCCTT ATCGGCGGAA GCCAATACAG TGAAAGCAAC
CAGCTTATAA GGGCAACTCA ATCAAAGCTT CAGGTAGGAA GTACAATAAA ACCTCTGATA
TATTCTGCGG CCATTGACGA AAAGGTAATT ACAGCCGCTA CAAGAATGGA TGATACTCCT
CAGGTTTTTG AGTCTGCAGA CGGAGTACAG TATATTCCGA ATAACTATGG CGGAAAATGG
AACGGCACTG TTCTGGTATA TAAGGCACTA CCCCTTTCAT TAAATATTCC GGCTATAAAA
ACTCTCGAAT TGGTAGGCTT TGATAGAGCC ATAGACCGCA TTGCCGCTCT TATGGGGATC
ACGGACCCTG TCGAAATTGA TAAAACCTTT GAAAAGGTAT ATCCTTTGGC TCTCGGAATA
AGCGCCGTAA CACCTGTCCA ACTTTTAAGA GCCTTTGCAG TCTTCGGAAA TCAGGGGCGT
GCCGTAGATC CGATAGCCGT AAGAGCCATC GAAAACCGGG ACGGCGTTAC AATCATGGAT
CCTGAACTTG ACCTTAGAAT TGAGCAAAGA AAGCGCGGAG CAGCTATGCA GGTAATAAGT
CCGAGCAATG CCTTTATAAT GACTGAGATT TTAAAAAAGA CTATTACTCT GGGAACATTA
TTCGGTGCTT CTTCAGGCGG TAGTAAATTT GATTATAAAG ATGAAAAAAC AGGCAGAATA
TTTAGAATGC CGATGGCTGC AAAAACCGGA ACAACGCAAA ACTGGTCGGA CTCATGGGCG
GCAATATATT CTCCATACTA CTCTGCTATT GTATGGTATG GATTTGACAG AGGCGGATAT
TCCTTAGGAA CGGATAATGC CGGTGCTGCT CTTTCAGGTT ATGTAGCGGC AAACTTTATG
CGTGAAGTTC ATAAAACTAA GCCCTTTAAA GACTTTGTAA GGCCCGAAAA AGGGGTAATA
ATGGTTGATG TATGTAAAAA ATCGGGAATG CTACCTTCGG AAAACTGTAC AGACGAAACC
ATTACCCTTC CCTTTTTATA TGGAACAGAG CCGACCGAGA TTTGTACGGA ACATACAGCC
GGTATAAAAT TACGGGATAT CGGTATAGAC AGAATTAAGG GCTCAGGAAT GGCTCAAGGA
GAAGAAGAAA TAAAAATAGA CACAGCACCT ATTGAAATAG ATCCTTCAAT TTTTATAGAT
CCTCCGGCAG GCGGTGAAGG CGCAACCAAA ACTAAAAATA CTGAGGAAGA GTCAACCGAA
ACGGAAAATC CATGGATATA A
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| Protein sequence | MNKLSKIVYL YLILIFLILA GGAFALGKMM AMTENIKQSE LFVDFNPALP SRILDIRGDL
ITEFSLDEKR ELINYGDISP NLIAALLARE DRLFYEHKGF RIKSIIRAII GQLTRRSLGG
GSTITQQIAG ILYCDRTDKS VKRKIKELWW AIQMERRHSK DEIMMLYLNE AYFGGGTSGV
SAASRFYFGH SASELTPAEA AILIIQLSNP TRYNPFNYPN RAKERQENVL EGMINLGFIS
KKEAAESFED YWANFDYTRI ALSAWLTRED KARWFSEYVR REVADNMLYG TMNLYKDGYT
VHTTCDLRHQ EIADREFQKY IAIANDRVSA STSTSFSQAE QYSNLTALLT LCFGIESLSV
GEKQLKVKTN SYYQNKLNST IDVLALMCGI DNLKTLTKQS TAKMQEVLME RVVEGTFISI
ENETGYITAL IGGSQYSESN QLIRATQSKL QVGSTIKPLI YSAAIDEKVI TAATRMDDTP
QVFESADGVQ YIPNNYGGKW NGTVLVYKAL PLSLNIPAIK TLELVGFDRA IDRIAALMGI
TDPVEIDKTF EKVYPLALGI SAVTPVQLLR AFAVFGNQGR AVDPIAVRAI ENRDGVTIMD
PELDLRIEQR KRGAAMQVIS PSNAFIMTEI LKKTITLGTL FGASSGGSKF DYKDEKTGRI
FRMPMAAKTG TTQNWSDSWA AIYSPYYSAI VWYGFDRGGY SLGTDNAGAA LSGYVAANFM
REVHKTKPFK DFVRPEKGVI MVDVCKKSGM LPSENCTDET ITLPFLYGTE PTEICTEHTA
GIKLRDIGID RIKGSGMAQG EEEIKIDTAP IEIDPSIFID PPAGGEGATK TKNTEEESTE
TENPWI
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