| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1660 |
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| Symbol | |
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| ID | 2739001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1710800 |
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| End bp | 1715356 |
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| Gene Length | 4557 bp |
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| Protein Length | 1518 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637160542 |
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| Product | leucine rich repeat domain-containing protein |
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| Protein accession | NP_972265 |
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| Protein GI | 42527167 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00213306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGT TTTTTACTTT AGGTGTTGTT AGAACTGTGA TTTTTGCTGT TTTGTTGAGC
AGTTTTTATA TGAGCTGTAA GCAACCGGTA ACAGTTATTA AAGAGCCGTA TGAGGTAAAT
ACCAATGCAA ATCGGATTAA AATACTGGTA ATTGGTGAGC ATTTAACAAA AGAAAAAGTT
TCGTTTTGGG TTGAAAAAGG AGCTGTAGGT TCTGAGGTAA AAAAAGAAGC TGAAAAACTG
ATTACTTTTA CTTCCGGCTA TGAACTTGCT TCATGGAAAT TGAATCAACA AAACGGTGCG
GATATAAGCG ATAAGGAAAA ATTTACCGAC GATTCAGTTC TCTTTGCGGT TGCAAAAAAA
ATAGACGAGC CGCAAAATAC CAATATTAAG ATTACTATCA AGCAGGTTGA ACATACAACC
GTATCGGAGC CGGAGTTTAC CGTTGGGTCA AGATCATCTT GGCTCAGCAT CAAAGAAACA
GCAATCAAGC GGCTTAATGT TGAAACAGGG TATGAGCTTA TCGGTTGGAA ACTTCGCACA
CAGGACAGTG TTTTTATCAA TGATTCATAC ACCTTTGAAA GCAATACGGA TATTTTTCCG
GTTGTTAGAC AGCAAGGCTC ACCGCAACTG AAAAAGTTTA CTTTGAGTAT ATTCGGCGAT
AGCAATATAA CAGTAAAGCG GCAAACGCTG ACGGTTGAAG AAGGCACAAA GTGGTCTGGG
GTTAAACAGG CAGCAACTGA TAGTATAGAA TGTGCTGAGG GCTATGAGTG TATAGCTTGG
AAAATCGACA ATCAAAGCGG TGCGGTTTTA ACCGACGACC ATGAGTTTAC GGCAGACACA
AAACTGTTTG CTGAAGAGAA AAAAATTCCT GTTCCTCCGG CCGAAATGAT TACCATAACA
GTTCAAGGTG ATGTCGGCAT CGAAGTAAAA AAAGATAGTA TAGAGGTAAA AAAGAATTCC
GTCTGGGCCG GTATAAAAAC CGCTGTTGCA TCGTGTGCGG TATGTAAACA ATATTACGAA
TTTGTGCAAT GGAAACTGGC TGATGGGTCT GGAACTGAAA TAACAAACGA AACCTCATTC
ACGGAAGATG TAACTGTTTT TGCCGTGTCC AAGCGAAAAA CTGTCACCGT CAGTATTGCA
GGAAATGACA AAGTTACGGT AAACACAGCA AGTCTTACTA TTGACTGTGG GTCGCTGTGG
TCTGAAGTAA AATCTAAAAT TGAAGCCTGC ATAAGCGTTG AAAACAGTTC GAGTATCAGC
TGGCTGCTCG GTGATGAAAA TGGTACAAGT ATAACGGATA ACTATTGTTT TGACTCTGAT
AGTGCCGTCT TTGTTAAAGC ATTTGACACA GGAATTTTTA GGCTGGATAA CTATGGGGCA
ATTACTGGAT ACACTTGTCA ACCTGAAAAT TTACCTTCAC ATCTTGTTAT ACCCGATCAA
ATAGGCGGAA AAACCATTAC AACAATAAAC CAGAATGTAT TTATCAACTG TAATGCAATA
AAAAGCGTTT CTTTCCCAAA GACTCTCATT AACGTACAAC CATATGCTTT TAGAAATTGT
AGGGAACTTC AAGCAGTTGA ATTTGCAGAT GGGGGAACAC AATGCTATAG TACTATTTTT
GATCAATGCA AAAAATTATC AAAAATTACA ATCTTGGGCG GTGTGGTAAA GAGTAACTTC
TACTATGCTT TTTCAAGCTC TAGTCAGCTG CATATTTCTG AAATTGTATT ATGTGAAGGT
GTTACAAAAA TCGAAGGTTA TGCATTTAAT AACTTTTCAG AGATAACGGA AATAACCATA
CCGGCGACTG TTACCGATAT CGATACAAAT GCTTTTGCAA ATTGTACAAG CCTTAAGACG
GTAGAATTCA AAAAAGGTTC TGTTACTATC GGCAATAATG CATTTTACAA CTGTAACCAA
ATTACGGAGT TGCGTATATT GAGCGGTGAT ATAAACTTTA AGTGCTCATT GGTACAGCAG
CCAAATAAAA TTTTGAGTCT ATACCTAGGT GAAGAAGTTA CTTCAATATG TTCTAATGCC
TTTTCCGGCT GTACACAACT TACGGGTTTG GATATTTCAC ACTGTAAAAA ACTGACGTCA
ATACATGCTG CTGCTTTTAG TAATTGTACA AGTTTGGAAG TCCTTAAATT ACCGGCTTCG
CTTGAATTTA TCGATAATTC TGCGTTTTTA TCTTGCAGCG GTATTGCCGA GTTGGATATT
GCCCATTGTG AAAACTTGAA AAGCATAAAG TCGACAAGCT TTGAAAATTG TTCAAACTTA
AAAACGGTTA AGTTACCTAA GTCAATAGAA ACTATTGAAA ATAGAGCTTT TTATGGTTGT
TATCAGATAG AACAAGTAGA TTTATCGCCA TATTCAAAAC TTACCAAAAT TGAAGACAGT
GTGTTCTCCG GATGTTCAGC ACTGCGGAGC ATTACCTTCC CGGATAATCT TGAGCGAATT
GGAAACTCTG CATTTAATAA CTGTTATGCT TTGACGGCTG TACAGTTTCC GAAAAATCTT
GAGCAAATAG GGGACTCTGC ATTTAGTAAC TGTTATGCAT TGACGGCTGT GCAGTTGCCG
AATAATCTTA AGCGAATCGG AAACTATTCA TTTAGTGACT GTAGTGCACT GACGGCTGTG
CAGTTGCCGA ATAACCTTTT AGAAATAGGT AGGAGTGCTT TTTATAATTG TTCGGCAATT
ACCGGCATTA CTTTCGGTCA AAAATTGAGA ACAATACAAG ATAATGCATT TGAAAAATGC
CGCGGTATAA GAGGTGCACT TGACATGCGG GCATGTACAA ATCTTACCGA AATTGGAGGT
TCAGCCTTTT TAGACTGTTC GGCGATTACG GAAATCAAAC TGCCCGCTTC GTTGCAAACG
CTCAAGGATA AGAGTTTTGC AAACTGCATA TCTTTACAGA AAGTTGTTCT TGGAAACGGT
GCAATCACAT ATACAACTGG TACTAGCGGT TCTTTTCTTA AGTGCAAAAG TATTAAGGAG
CTGACAATTC TTTCAGGCAA AGTAACTTTT AAGGTAAAAG ATATGCTTGC CGATTCATAT
AAAACGATTT CCTCGGTTGT TTTCGGGGAG GATGTTACCG AAATTGGTTC TACAGCTTTT
AGTGAATGTC TCGGTATAAA AGGCGTTTTG GATTTGTCGC AATGCGATAA ATTAACATCA
ATAGGTTATT CGGCCTTTTC CGGCTGCTCA AGGCTGCTTG GAGTCCGGTT ACCGAAAAAC
CTTACCAAAA TCGACAGTTC CGCCTTTTCA AGCTGTATAG GTTTATCAGG TGTTTTGGAT
ATGTCCGCTT GTAACAAGTT AGTGTCGCTC GGATCTTCCG CCTTTTACGG TTGCTCTAAT
ATAAGCGACA TTAAATTCCC CAAAAACATT AAAACTATCG GGTCATCTTG TTTTACAAAT
TGTTACAATA TAGCAGGCTC GATTGATATG TCAGGCTGTA CGGAATTGCA AAAAATCGAA
AATTCGATAT TTTCTTCCGA TAAAAAAATA CAAACAGTAA AGCTACCCCC GAATATTACC
GAAATAGCTG ACTCGGCATT TTTAAAATGT TCCGGTTTGA CGGAAATTAA ACTTCCGGAA
AGTCTTACAA AAATTGGGAA TAAAGCGTTT GGAGAATGTA CTGCCTTAGC TTCAGTCGAA
TTTGGAAAGG GCGATATTTT AATGGCAACC GGAAACGATG CGTCGTTTTA TAATGACAGA
GATATAACTA AATTATCTGT TTTAAAAGGC AATATAAATT TTAAGTGTTC AGATGTCTTC
CCTCATTCGT ATCAAAAAAT TAAGACTCTT ATTTTAGGTG AAGGTATTAC AGGAATCGGG
GCATCTGCGT TTTCGAGTTG TAATGGCATT GAAGGCACTT TGAATTTAGG TAATTGTAGG
GCATTGATCG CTATCGGTAA TCAAGCCTTT AATTCATGCT ATGGAATAAC CGGCGTGCAA
TTCCCTGCAA GCTTACAAAC ACTCGGAGAG TTGGCATTTA ACGGTTGTAA TGGCATAAAC
ACAATGATGG ATTTATCTCC GTGTACTTCA ATGCAATCTA TCGGAAAATC CGCATTTTAT
AACTGTACAA AAATTACCGG AGTAAAATTC CCGCAAAGCC TTACATCAAT CGGAAGTACT
GCTTTTTATC AGTGTGTTGC ACTTGAAGGT ATGGTAGATT TATCCTCGTG TTTAGACCTT
AAAATTATTG ATGTCGGACT ATTTCAAGGG TGCGGTTTAA TAAGCGGTCT GAAGTTACCT
AAAACTATCA CTACAATTGG AGCATCTGCG TTTGAAAACT GTAAAAAAAT TGATGCAGTT
GATCTATCAG TATGTGCCGA CTTAACTACT ATCGGGGTGC AGGCATTTAA ATCTTGTGCG
GAAGCTGTCA TAACCTTGCC GGGTAAGGTA AATTCAGTTG GTACAGCCGC TTTTGGAAAT
TATTCAAATG ATTCATACTG TAAAAAAGTA CGTATTCCCA GAGGGGCTGA CGGCGATAGT
TTGAAGGGTA GGGTAACAAG CTCCGGGTAC ACTGAAGCGA GAATTGAGAG GTATTAA
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| Protein sequence | MKKFFTLGVV RTVIFAVLLS SFYMSCKQPV TVIKEPYEVN TNANRIKILV IGEHLTKEKV
SFWVEKGAVG SEVKKEAEKL ITFTSGYELA SWKLNQQNGA DISDKEKFTD DSVLFAVAKK
IDEPQNTNIK ITIKQVEHTT VSEPEFTVGS RSSWLSIKET AIKRLNVETG YELIGWKLRT
QDSVFINDSY TFESNTDIFP VVRQQGSPQL KKFTLSIFGD SNITVKRQTL TVEEGTKWSG
VKQAATDSIE CAEGYECIAW KIDNQSGAVL TDDHEFTADT KLFAEEKKIP VPPAEMITIT
VQGDVGIEVK KDSIEVKKNS VWAGIKTAVA SCAVCKQYYE FVQWKLADGS GTEITNETSF
TEDVTVFAVS KRKTVTVSIA GNDKVTVNTA SLTIDCGSLW SEVKSKIEAC ISVENSSSIS
WLLGDENGTS ITDNYCFDSD SAVFVKAFDT GIFRLDNYGA ITGYTCQPEN LPSHLVIPDQ
IGGKTITTIN QNVFINCNAI KSVSFPKTLI NVQPYAFRNC RELQAVEFAD GGTQCYSTIF
DQCKKLSKIT ILGGVVKSNF YYAFSSSSQL HISEIVLCEG VTKIEGYAFN NFSEITEITI
PATVTDIDTN AFANCTSLKT VEFKKGSVTI GNNAFYNCNQ ITELRILSGD INFKCSLVQQ
PNKILSLYLG EEVTSICSNA FSGCTQLTGL DISHCKKLTS IHAAAFSNCT SLEVLKLPAS
LEFIDNSAFL SCSGIAELDI AHCENLKSIK STSFENCSNL KTVKLPKSIE TIENRAFYGC
YQIEQVDLSP YSKLTKIEDS VFSGCSALRS ITFPDNLERI GNSAFNNCYA LTAVQFPKNL
EQIGDSAFSN CYALTAVQLP NNLKRIGNYS FSDCSALTAV QLPNNLLEIG RSAFYNCSAI
TGITFGQKLR TIQDNAFEKC RGIRGALDMR ACTNLTEIGG SAFLDCSAIT EIKLPASLQT
LKDKSFANCI SLQKVVLGNG AITYTTGTSG SFLKCKSIKE LTILSGKVTF KVKDMLADSY
KTISSVVFGE DVTEIGSTAF SECLGIKGVL DLSQCDKLTS IGYSAFSGCS RLLGVRLPKN
LTKIDSSAFS SCIGLSGVLD MSACNKLVSL GSSAFYGCSN ISDIKFPKNI KTIGSSCFTN
CYNIAGSIDM SGCTELQKIE NSIFSSDKKI QTVKLPPNIT EIADSAFLKC SGLTEIKLPE
SLTKIGNKAF GECTALASVE FGKGDILMAT GNDASFYNDR DITKLSVLKG NINFKCSDVF
PHSYQKIKTL ILGEGITGIG ASAFSSCNGI EGTLNLGNCR ALIAIGNQAF NSCYGITGVQ
FPASLQTLGE LAFNGCNGIN TMMDLSPCTS MQSIGKSAFY NCTKITGVKF PQSLTSIGST
AFYQCVALEG MVDLSSCLDL KIIDVGLFQG CGLISGLKLP KTITTIGASA FENCKKIDAV
DLSVCADLTT IGVQAFKSCA EAVITLPGKV NSVGTAAFGN YSNDSYCKKV RIPRGADGDS
LKGRVTSSGY TEARIERY
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