| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1654 |
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| Symbol | |
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| ID | 2738995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1702359 |
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| End bp | 1704971 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637160536 |
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| Product | ATP-dependent helicase HrpA, putative |
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| Protein accession | NP_972259 |
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| Protein GI | 42527161 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00280546 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA TACGTTGTCA AGCCTGTTCC ACCATACTTG AAGCCTCCTA CAAAATAAGC
TATAATGCTC AAGATATGAA ATATAAAAAT CTACCTGTAT ACGAACAAAA AGACAGAATA
TTGGAAATGC TTGAGCACAA TCAGGTAATC GTTGTAGAAA GCCCTACGGG TTCAGGCAAG
ACTACCCAGC TGCCGGTTAT TTTACATGAA GCAGGCTACA GCCGTTCAGG TATGATAGGC
GTTACCCAGC CGAGGCGTAT TGCAGCCCTT TCGGTGAGCG AATTTATTTC AAAACAGCTT
AAAGAGCCTA TGCCCGGCCT TGTCGGATAT AAGATGCGCT TTGAAGATAA GACTTCAAAC
GATACGAAAA TAAAAATAAT GACCGACGGC ATTCTTTTAC AGGAACTTAA ACTGGATCCT
TGGCTCAGCA AGTACTCCGT AATCTTGGTA GATGAGGCTC ATGAGCGGAG CTTAAATATA
GACTTTATAC TGGGACTTTT AAAACGGATA ATAACGGAAC GAAAAGATTT TAAGGTTATA
ATTTCGTCGG CCACAATAAA TACAGATCTA TTTTCGATGT ACTTTGACGG ATGCCCCGTA
ATCAAAATAG ATGCCATCAC CTACCCTGTT ACCCTGATCT TTGACCCCCC TGCGGTTAAG
GCTTCTACCG ATACCCAAGA AGCGGAAACG GCCTTGATGG ACAAGATAGC CTCGATTGTA
GGACGCATTT TAAGCGAGGG ACGAAGCGGT GCCATTCTGG TTTTTCTTCC GGGGGAAAGA
GCCATCAAGG ACTGCATTGA AAGACTTTCA AAAGAACCGT GGTACAGAAA ACTTTTTATT
CTCCCCCTCT ACGGCCGTTT AAGCAAAGAA GAACAAGAAA GAGTTTTTAA ATCCCCGCCC
TTCGGAAAAA AGAAGATTGT TATATCGACA AACATAGCGG AAACCTCCAT AACGATAAAC
GACATTGCTG CCGTTATAGA CTCGGGGCTT GCAAAACTTA ACTTTTATAA TCCTTTTACC
TTTACTTCAA GTTTGGATGA AACCCTAATA TCTCGAGCCT CATGTAATCA AAGACGAGGC
AGAGCCGGAA GAACTCAGGA AGGAGTATGC TACCGCCTTT ACACACGCAA GGACTTTGAA
ACAAGACAGC TTTATACCCT CGAAGAAATC TACCGTACAG ACCTATCCGA GGTTGTTATG
CGTATGGCGG AACTGGGAAT TCTCGACTTT GAAAATTTCG ATTTTATTTC GCCTCCGGGT
AAAAAAGGCA TAATAGGAGC CATAGATACC CTAAACATGC TCGATGCCCT AGAAAGCGAC
CGCTCTTTAA GCAGCATAGG AAAGATGATG TGTCTTTTCC CTTTGGCTCC AAGACAATCC
CGAATCATAG TTGAAGCAAT TACAAGATAC CCCGACCTTG TAGAAGAAGT TTTAATCGCC
GCGGCTTTTT TATCGGCTCG GAGCCCCGTC ATCTTCCCCG AAGGCGAAGA AATTGAAGCC
CGCAAGGCTC ACGCCCTTTT TGATGAACCC CTCGGAGATT TTGCCTCATT CTTAAAGGTT
TTTAGAATGT ACTCTCAAGC CCTCGATAAG GAAAGGTTTT GTAAAATTCA CTATCTCGAT
GACAGAGTAA TGGCCGAAAT AGCCAACATA AAAGAACAAC TTGAACTCAT AGTTTCGGAT
ATGGGCGTTC CGATTCTTTC GGGCGGAAAA ATGGAACACT ACCTTACGGC TATAGCCAAG
GGAATGATTC AGTTTGTATG CTCGGCTCAG GGAAGGGACT CTTACCGCTC CCTCACAACA
GAAAAGATTT TTATCCACCC CGGCTCCTGC ATGTACAAGG AAAAAGAACA GTTTATAGTT
GCAGGCGAAA TAGTCAGAAC TTCGCGTATG TATGCCATGT CGGTTTCTCC TCTTTCAAAA
AAGATAATTG AAGAGGTTGC CCCTGCCCTT TTAGAAAGAA AGGATAAAAG AGCAAAGAAA
GAAAAAGACG AACACAGGGC AGACCAAAAA GAAGAAAAGA AAAAGCCGGA AGAAGAAAGC
GTTCTTATCG AGGGAACTCG CTATCTTATC AAAAAAATCA AGGGCAAAAA GCATCTCATT
CTTCCATGGA AAGAATTTAA ACTTACGGCC GAGGCTGTCT TCAAAAAATA CAGTGAAGAA
AATCAAAACG GAGCCTTGGA GCAATTAAAG GGCTTAAGGG GAAAAATAGA AATCAATAAG
AGCGAGCTCC TCTCAGGCGA AAAGATGGAT TTAATTTTAA ATGTGGTAAA TAATTTTAAT
ATTGAACAGA TAGAAAAAAC AGAAGATGAA AAGCACTTTG ACAGGAATAA AAATTATTTT
ATTGAAGAAG ACTTGGAAGC CCTTGTAAAT TCCTTAAATC TTTTATTTAG AACTACAATA
GCAAAAAAGA CTACAAAGCA GCTGGGCTTT ATAACCCTCT TTTGTGACGG TACAGGACAT
TTTTGGTTTA AAACTTCAAG AGGTTTTCAT ACGGCCTTAC ACGAAAGCCT TGTATCCCTT
CAAAGCTTGA TTGACCTTGC AGGAGAAAAT TTTAACGAAG ACCAAAAAAT AATAGTCCGC
ACTATCTACG GAAAAATGAA TAAGATGATT TAA
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| Protein sequence | MLKIRCQACS TILEASYKIS YNAQDMKYKN LPVYEQKDRI LEMLEHNQVI VVESPTGSGK
TTQLPVILHE AGYSRSGMIG VTQPRRIAAL SVSEFISKQL KEPMPGLVGY KMRFEDKTSN
DTKIKIMTDG ILLQELKLDP WLSKYSVILV DEAHERSLNI DFILGLLKRI ITERKDFKVI
ISSATINTDL FSMYFDGCPV IKIDAITYPV TLIFDPPAVK ASTDTQEAET ALMDKIASIV
GRILSEGRSG AILVFLPGER AIKDCIERLS KEPWYRKLFI LPLYGRLSKE EQERVFKSPP
FGKKKIVIST NIAETSITIN DIAAVIDSGL AKLNFYNPFT FTSSLDETLI SRASCNQRRG
RAGRTQEGVC YRLYTRKDFE TRQLYTLEEI YRTDLSEVVM RMAELGILDF ENFDFISPPG
KKGIIGAIDT LNMLDALESD RSLSSIGKMM CLFPLAPRQS RIIVEAITRY PDLVEEVLIA
AAFLSARSPV IFPEGEEIEA RKAHALFDEP LGDFASFLKV FRMYSQALDK ERFCKIHYLD
DRVMAEIANI KEQLELIVSD MGVPILSGGK MEHYLTAIAK GMIQFVCSAQ GRDSYRSLTT
EKIFIHPGSC MYKEKEQFIV AGEIVRTSRM YAMSVSPLSK KIIEEVAPAL LERKDKRAKK
EKDEHRADQK EEKKKPEEES VLIEGTRYLI KKIKGKKHLI LPWKEFKLTA EAVFKKYSEE
NQNGALEQLK GLRGKIEINK SELLSGEKMD LILNVVNNFN IEQIEKTEDE KHFDRNKNYF
IEEDLEALVN SLNLLFRTTI AKKTTKQLGF ITLFCDGTGH FWFKTSRGFH TALHESLVSL
QSLIDLAGEN FNEDQKIIVR TIYGKMNKMI
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