| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1641 |
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| Symbol | rpiA |
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| ID | 2739750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1692017 |
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| End bp | 1692736 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637160524 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | NP_972247 |
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| Protein GI | 42527149 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACACGT CACAGTTAAA AGAAAGAGTT GCCTATCATG CAATAGACAC TCTTTTTTCG
GAAGGAAAAA TTTTTGACGG AATGAAGATA GGACTCGGCA CAGGCTCTAC AGCTATGCCG
GCTGTACACC GTCTCGCCCA ATTATTGTCG TCAGGTAAGT TAAAAAAAAT ATACGCCGTA
CCTACAAGTT TTCAAACATC AATCGAATGT GAAAAACTAG GCATCCCTAT TTATTCTTTA
AGTTCTCAGC AAATAGGAGG AAGCTTAGAC CTTGCTATAG ACGGAGCAGA CGAAATCGAC
CCCGATAAAA ACCTAATCAA GGGAGGCGGA GCTGCCCTCC TCAAAGAAAA AATAATAGCA
TATAATTCAA AAGAATTTGT TGTCATTGCC GATGAAAGAA AAAAAGTTAA ATCTATGGGA
AAAGGATTTG CCCTTCCGAT AGAAATTATA CCGGAAGCAC GTTTAAGTAT TACAAAGGCT
CTTGAAGCCC AAGGCATAGA AGTATTTCTG CGTGAGGGCG TAAAAAAAAT GGGACCTGTT
GTTACCGACA ACGGAAACTT TATAATTGAT GTAAAATGGC CTAAAGCAGC CGATGTAGAT
CCCAAAGCCT TGGAAGAAAG TTTAAACAAG ATTACAGGTG TAGTAGAAAA CGGTTTTTTT
ACAAAAAACA CTCCAAGAGT ATTTATCGTA CACCAAGATG GAAATATAGA AGATTTATAA
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| Protein sequence | MDTSQLKERV AYHAIDTLFS EGKIFDGMKI GLGTGSTAMP AVHRLAQLLS SGKLKKIYAV
PTSFQTSIEC EKLGIPIYSL SSQQIGGSLD LAIDGADEID PDKNLIKGGG AALLKEKIIA
YNSKEFVVIA DERKKVKSMG KGFALPIEII PEARLSITKA LEAQGIEVFL REGVKKMGPV
VTDNGNFIID VKWPKAADVD PKALEESLNK ITGVVENGFF TKNTPRVFIV HQDGNIEDL
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