| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1631 |
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| Symbol | citF |
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| ID | 2739740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1680150 |
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| End bp | 1681646 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637160514 |
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| Product | citrate lyase, alpha subunit |
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| Protein accession | NP_972237 |
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| Protein GI | 42527139 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3051] Citrate lyase, alpha subunit |
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| TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA TACTTGGAAG AGAAGGCTTG GACAATCCTT TTAAGGGAGC CTTTGTAAAT
AAAAAAAATG CAAAATATGA GCTTACAAAA AATGTAAAAC CCGCCTTCGG GAAAAACGTA
TCCCAAGCCC TTGATGAGTT CAAACTCCAT GACGGAATGG TTATAAGTTT TCATCATCAC
CTTAGAAACG GCGACTATGT TCTTGATATG GTAATGAGGG AAATTAAAAA AAGAGGAATC
AAAGATTTGA CCGTAATGGC TTCTTCGATT TTCCCCTGCC ATGAGATTTT GGTTGAACTT
ATGGAAGACG GAACTGTTAC CCAACTTATG ACATCCTATA TGTCAGGGCC TGTTGCAAAG
GCTGTAAGTT ACGGTAAGTG TAAAAAGCCC GTAATTATGA CTACCCACGG CGGACGCCCC
AGAATGATTT TAGAAAAAGA GGTTACGATA GACGCTGCCT TTTTAGCCTC GCCCTGTGTA
GACGATCAAG GAAATATTTC AGGCTCCGAA GGAAGGTCAT TTTGCGGTTC CTTAGGTTAT
GCCGTAGCCG ATGCTCAAAT GGCAAAAAAA ACTATAGCCA TTACCGATAC AAGGGTTTCA
AAAGTTAAAA GAGCAGACAT TGAAGGCCGT TTTGTAGACA TGGTGGTAGA GGTAGATAAA
ATAGGAGACC CTGCAGGTAT TGTAAGCGGA ACAACTCAGA TTACAAAAGA TCCGATCGGC
TTAAAGATAG CCCGCGACTG CCGCACTCTT ATTGAACACT CAGGCCTTTT TAAGAACGGC
TTTAGTATGC AGACCGGAGC AGGCGGTATT TCCCTTGCTG TTGCAGACGA AATGCACCGA
GCAATGAAAG AAAAAAACAT AAAGGGAAGT TTCGGCTGCG GCGGAATTAC AGGCTATTTT
GTAAAGATGC TTGAAGAAGG CCTTTTTGAA GATCTTTATG ATGTTCAGTG CTTTGACCTT
TCGGCCGTAG ACTCTATCGA AAAAAATGCA AACCATCACA AGATTTCAGC CGACCTTTAT
GCAAACCCTA ACAATCCCGA CCATGTTGCA GGAAAGCTTG ATGTCGTTAT CCTCGGTGCG
AGCGAAATAG ATTTGGACTA TAACGTAAAT GTAACCACCG GTTCCGATGG GATTATATTG
GGCGGTTCGG GAGGACATGC CGATACGGCA GCCGGAGCAA AACTTTCGAT AATCGTTTCA
AAGCTATTTA ATGCCCGCAT TTCTTGTCTC GTCGATAAGG TCCGCACTGT AACCACTCCG
GGAGAAACAA TCGATGTTTT TGTTACTGAC AGAGGTATTG CAATTAATCC GCGCCATGCA
GATTTAATTA AAAAGCTGAA GGCGGAAACA AATCTTGAAA TTAAAACCAT CGAAGAATTA
AAAGAAATTG CAGAATCCTT TACGGGAAAA CCCCAAGTTA AGCCCCGTTC CGGCGAAGTG
GTGGGAATAA GCACCTACCG TGACGGCACC GTTTTGGATG TCATAAATAA GGTTTAA
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| Protein sequence | MNNILGREGL DNPFKGAFVN KKNAKYELTK NVKPAFGKNV SQALDEFKLH DGMVISFHHH
LRNGDYVLDM VMREIKKRGI KDLTVMASSI FPCHEILVEL MEDGTVTQLM TSYMSGPVAK
AVSYGKCKKP VIMTTHGGRP RMILEKEVTI DAAFLASPCV DDQGNISGSE GRSFCGSLGY
AVADAQMAKK TIAITDTRVS KVKRADIEGR FVDMVVEVDK IGDPAGIVSG TTQITKDPIG
LKIARDCRTL IEHSGLFKNG FSMQTGAGGI SLAVADEMHR AMKEKNIKGS FGCGGITGYF
VKMLEEGLFE DLYDVQCFDL SAVDSIEKNA NHHKISADLY ANPNNPDHVA GKLDVVILGA
SEIDLDYNVN VTTGSDGIIL GGSGGHADTA AGAKLSIIVS KLFNARISCL VDKVRTVTTP
GETIDVFVTD RGIAINPRHA DLIKKLKAET NLEIKTIEEL KEIAESFTGK PQVKPRSGEV
VGISTYRDGT VLDVINKV
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