| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1629 |
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| Symbol | lpdA |
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| ID | 2739738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1677243 |
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| End bp | 1678604 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637160511 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | NP_972235 |
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| Protein GI | 42527137 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGATT TAATTGTTTT GGGCGGTGGC CCGGGCGGCT ATGTTGCGGC CATAAAAGCT
GGAAGGGCAG GGCTAAAAAC CGCTCTTATC GAAAAAAACA GGCTTGGAGG AACTTGTTTG
AACAAGGGCT GTATTCCGAC AAAATATCTT CTTCACACAG CCGAGGTCTT TGGAAGTTTT
GCCGAAAACG ATCTCGGTCT TTCAGGTGAA AACTTAAAAT ACGATATTAA GGCCATCTAC
GAGAAAAAAA ATGCTGTTGT GGATAAACTT GTAGGCGGTA TCGAAAAACT CATTGAAAAC
GCCGGCGTTG ATTTTTATAA CGGGGAAGGC AAAATCACTT CAAAATCTTC CGTAAGTGTA
AATGGAAAAG AGCTTGAATT TAAAAACCTC ATCATCGCAA CAGGTTCTTC TGTTTTTGCT
CCTCCGATAG CCGGAATAGA AACTGCTATG ACATCTGACG ATATTTTAGG AAAAGAGCCT
GTCGATTTTA AGAGCGTCAT CATCATAGGC GGCGGTGTTA TAGGCATTGA GTTTGCCACA
GTCTATGCAA ATTTAGGTAA GGAAGTAACC ATCGTCGAAC TCGAAAAAAC AATTCTTCCT
CCCTTTGATA GGGATATTGC AATGCAGCAG GCCATTGTTT TAAAAAAGAG GGGAGTAAAA
ATAATAAACG GAGCCATGGT AACCAAAATC GAAAAAACGG GCTGTACCTT TACCCTTAAA
GAAAAAGAAG AAAGCATTAC AGCCGATGCC GTAATCGTCT GTATCGGACG CATTGCCGAA
ATAAAGGATA TCGGTCTTGA TTCTGCCGGA ATCGAATACG ATAAACGGGG CATAATTACC
GATGCCTGCA TGAAAACTAA TGTCGAAGGT ATTTATGCCA TTGGAGACGC AGTAAAGGGA
AATGTAATGC TTGCCCACAA TGCCGAAAAT CAAGGTCATC TGGTTGTCGA AAATATTGTA
AACAATACTA AACACGAAAA ACAAGATGTT ATTCCTTCCT GTGTATATTC CACACCGGAG
ATTGCAGGAG TCGGTCTTTC CGAAAAAGAG GCTGAAGCCA AAGGAATTAC CGTAAAAATC
GGAAAAGTTC CAATGGGTTC AAACGGAAAA TCGGTGCTTT CAGGCTTGGA TGTAGGCTTT
ATTAAGGTTC TGTTTAATGA AGAAGACAGG ATTGTAGGCT GTCAGATGAT GTGCGATTCG
GCTACCGATA TGATAGGTGC CATAGGAACT CTTGTAACAA ACAAGGCTAA GAGGGAAAAT
ATCTTAAAAT CCATGTATCC TCATCCTACG GTAGTAGAAG CCTTTTATGA GGCTGTAGAA
GATGTCGAAA AGTCGGCTAC CCACATGATC TATAAAAAAT AA
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| Protein sequence | MYDLIVLGGG PGGYVAAIKA GRAGLKTALI EKNRLGGTCL NKGCIPTKYL LHTAEVFGSF
AENDLGLSGE NLKYDIKAIY EKKNAVVDKL VGGIEKLIEN AGVDFYNGEG KITSKSSVSV
NGKELEFKNL IIATGSSVFA PPIAGIETAM TSDDILGKEP VDFKSVIIIG GGVIGIEFAT
VYANLGKEVT IVELEKTILP PFDRDIAMQQ AIVLKKRGVK IINGAMVTKI EKTGCTFTLK
EKEESITADA VIVCIGRIAE IKDIGLDSAG IEYDKRGIIT DACMKTNVEG IYAIGDAVKG
NVMLAHNAEN QGHLVVENIV NNTKHEKQDV IPSCVYSTPE IAGVGLSEKE AEAKGITVKI
GKVPMGSNGK SVLSGLDVGF IKVLFNEEDR IVGCQMMCDS ATDMIGAIGT LVTNKAKREN
ILKSMYPHPT VVEAFYEAVE DVEKSATHMI YKK
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