Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1597 |
Symbol | |
ID | 2739794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1646785 |
End bp | 1647492 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637160479 |
Product | transporter, putative |
Protein accession | NP_972203 |
Protein GI | 42527105 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGC GCTGTAAACG ATATGGAATA AAATATGATC CAAGAATTAA ATTATTGCAA GTTTTATTAG TAAGTGTTTT TGTTTTTACA TTACCGGGTA AAAAATATGA GATATTGCTT TTTTTATCGG TCTTTATCTT TGCAATAATG AGCGGGATAA ATAAAACTGC TGTTAAATTT CTATTTGTAT ACAGCGGGCT TTTTATAGCA GCCGAGATAA GTCCTTTATT TATCGCAACA ACAATACATT ATTTTCTTTT ATGTTTTGTT ACAATACTAT TTGCTGCAAC AAACTTGATG AGAACTGCTG AAATATCGGA AATATTGGCT ACCTTACAAA ACATGAAAAT TCCATACTAT ATCAATATTC CTTTAGCGGT TATCCTGCGT TTTTTTCCTA CGATAAAACA AGACATTGTT TGCATTAAAC AAGGAATAAA GACTAGAGGA ATAGATGTTT CTCTATTGGG TGTATTAAAG CATCCATGTA AAATGTACGA AATGATGTTG ATACCGTTCT TAATGAGAAT GTTATCTACT GCAACGGAAT TAGCCGCTTC CGTTGAAACA CGAGGATTAG GTGTTTCAGG TAAAAAAACA AGCTATAGAG AAGTTCGTTT CGGGATGCTT GATATATTGC TATTGATAAT AATGCTTGTT TTTTATACAG CTGTTGTTGT TATGAAAATA AAAAATATTG AATTTTAA
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Protein sequence | MFKRCKRYGI KYDPRIKLLQ VLLVSVFVFT LPGKKYEILL FLSVFIFAIM SGINKTAVKF LFVYSGLFIA AEISPLFIAT TIHYFLLCFV TILFAATNLM RTAEISEILA TLQNMKIPYY INIPLAVILR FFPTIKQDIV CIKQGIKTRG IDVSLLGVLK HPCKMYEMML IPFLMRMLST ATELAASVET RGLGVSGKKT SYREVRFGML DILLLIIMLV FYTAVVVMKI KNIEF
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