| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1537 |
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| Symbol | |
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| ID | 2740899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1580562 |
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| End bp | 1581614 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160417 |
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| Product | polyprenyl synthetase family protein |
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| Protein accession | NP_972143 |
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| Protein GI | 42527045 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATATATT GTGAAAAGAT GATGGAATTA AAAAATCGGC TTGAACATAT CGAAAAAACT
CTCGATTGTT TTTTGCCTGA AAAAATAAAT TCTTCGTGGA TTTCTCAAAG TTTCGGCGAA
TTAGCTTACA GCTTGCCGGA CAGCTTTTTT TTAAATATCA TCAATCCTGT AAGGGATTTG
GTAAAACGCG GAGGAAAAAG GTGGCGGCCC CTTCTATGTG TTCTTTCATG CGAACTTGCA
GAAGGCGATC CCGAAAAGGC CTACCCCCTT ACCCCCCTCA TCGAATTTTG TCATACGGCA
AGCCTCGTCC ATGACGATAT AGAGGATAAA TCCGATACCC GCAGAGGGGC TCCTGCGGCT
CACATAAAAT ACGGGCTTGA TACGGCTTTA AATTCCGCCT CATGGCTTTA TTTTGAAGCC
CTTAATCCCC TGATAAATTA TGAAGTTTCA GAATCCGTAA GGGCCGTAAT ATACTCGCTT
TACTCGCAAA ATTTAAGAAG GCTCCATTTA GGGCAGTCTA TGGATATAGG CTGGCATTCA
AATTCCGATA TAATTCCGTC AGTTGATGAA TACATAACTA TGATAAGTCT AAAAACAGGC
TCTCTTGCAA AGTTGGCAGG AGAATTAGGC TTTATAGCTG CCGGTAAACC TATCAATGAA
GTTCTGGAAT ACGGAAAACT TATGACCGAT ATGGGTATAG GTTTTCAGAT CTTGGACGAT
GTAAAAAATA TTACTGAAGG CAACGCCGGT AAAAGGCGGG GCGATGACAT AGTTGAAGGC
AAAAAAAGCC TTCCTCTAAT TTTTTATACG GAAGAAAATC CTGAAGGTGT CGAAAAAATA
AAGCTTTTAT TTAAACAGGC TGCAAAAGAA GGCATAGAAT CTCCCGCAGT CGAAGCCTCG
ATTTCGGCTA TTTGTTCTTC AAAGGCTGTA AAAAGGGCAG AAGATTACGG CAAAAAGATT
GTAGAAGCTT CATTGATAAA GCTTCAAAAT AATTACAAAC AAAACGAAGC AAAAGAACTT
ATCTTCGATT TGTTTAACAC GATATTGAGG TAG
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| Protein sequence | MIYCEKMMEL KNRLEHIEKT LDCFLPEKIN SSWISQSFGE LAYSLPDSFF LNIINPVRDL
VKRGGKRWRP LLCVLSCELA EGDPEKAYPL TPLIEFCHTA SLVHDDIEDK SDTRRGAPAA
HIKYGLDTAL NSASWLYFEA LNPLINYEVS ESVRAVIYSL YSQNLRRLHL GQSMDIGWHS
NSDIIPSVDE YITMISLKTG SLAKLAGELG FIAAGKPINE VLEYGKLMTD MGIGFQILDD
VKNITEGNAG KRRGDDIVEG KKSLPLIFYT EENPEGVEKI KLLFKQAAKE GIESPAVEAS
ISAICSSKAV KRAEDYGKKI VEASLIKLQN NYKQNEAKEL IFDLFNTILR
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