| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1536 |
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| Symbol | |
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| ID | 2740898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1580034 |
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| End bp | 1580558 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637160416 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_972142 |
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| Protein GI | 42527044 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAT CGGCTCAATT TTTTAACGAT ACGGGAGTGA GCATGTCTAT GCAGGGCTTT
CACAATGAAG CTATAGCCTG CTTAAAAAAA GGGCTTGCCC TTGAACCCGA TAACAGCCTG
ATGTGGCTCA ACCTAGGTTT GAGCTACTAT GCCGCTAAAA GGCAAAATGA CAGTAAGTTT
GCCCTTTTTC AATCCTTAAA ATATAATCCC TATGAGGCTG ACGCTTGGGA TTCATTAGGG
CTTGTTTTAT TTGAAACGGG AGACATCGAC CAGGCAGAAA GAGCCTTTGA AAGCGCTATA
AAACTGGAGC CCGAAAACGG AAGGGTTTGG AATAATTACG GAACGGTTTT ATTTAATAAG
GAAAACTATA GGGCTGCACG GAGAGCCTTT GAATCGGCCG TTACACTTGA CCCTGAAATG
GGAGATGCGG TTTTTAACTT GCGTGATACC TATCTTGAAT TGGGAATGAA TGATTTGGCT
GAAAGATGCA ATAAAATTTT AAAAGAGATG GATTATCAAG AATAA
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| Protein sequence | MQESAQFFND TGVSMSMQGF HNEAIACLKK GLALEPDNSL MWLNLGLSYY AAKRQNDSKF
ALFQSLKYNP YEADAWDSLG LVLFETGDID QAERAFESAI KLEPENGRVW NNYGTVLFNK
ENYRAARRAF ESAVTLDPEM GDAVFNLRDT YLELGMNDLA ERCNKILKEM DYQE
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