Gene TDE1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1500 
Symbol 
ID2739901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1546853 
End bp1548160 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content33% 
IMG OID637160379 
Producthypothetical protein 
Protein accessionNP_972106 
Protein GI42527008 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACAATT ATTACAATAT ATTTATATAT TGTATCTTGT ATAATATCAA TTGTCAATGT 
ATAATTATAA CAATTATGAA AAAAAATCTT AACTATTATT TATTTTTATT TATCACAGCG
GCGGTTTTTG TTTTAAATTC CTGTAATTCA ACCGAAATTT CCGAATCAAA ATTACCTCAA
AAAGAAAATG ATATAAGCGA ACTTGTTTTA AGTTTCTCAG GCGATATTAT GGCTCATGAT
GTCAATTTTA AAATGAAAGA CTATAATCGA ATCTATGATG ATGTCAGGGA TATTCTTTTA
AACGATGATT TAACTTTTGG AAATGTAGAA ACACCTGTCT GTGAAGAAAG ACCGCTTTCA
AGCTTTCCAT GCTTTAATAT ACATAAAGAC TATCTAAGAG CCGCTATTGA AGGGGGTTTC
GATGTTTTCT CGTTTGCCAA TAATCACACT AACGATCAGG GTATTCAAGG AATAGACGGA
ACTATTAAAA GTTTTAATGC TTTAAAAGAA GAGTATAAAA ATAAAGAGCT TTTTTCTTCC
GGTTTAAAAA ACAAAGAAGA TGAAGATTTT AAACCTGTTC TAATCGAAAA AAAAGGCTGG
AAGATTTTAT TTTTATCGGT AACGGAACTT ATCAACTCTC ACGGCAAATC AAAACACAGA
CTTTATTACT CGGAACCCAC AAAGACAGGA AGGGAAAAAC TTCTTTTATC CATAAAAAAA
ATGAGGGAAG AAAATCCTTG CGATATTTTT ATTCTGTCTC TTCATCTAAA CGAGGCGGAA
TACGGCCTTA AGGTTTTAGA TAGTAAAAAG ACATGGTTTA AGGCTTTAGC CCAAGCAGGA
ATAGATGTAG TCTGGGCTAA TCATCCCCAT GTTTTACAGG ATTGGGAACT TTCCGATGTG
GAAATCTTAA CCGATGATTC CAAAAAAGAT ATTATTCAAA TCAATAAAGG AGAGAATAAT
GAACCTCTTG ACTCTTTTCT CACACATAAA AAAAATGCCT TTTTTATGTA CTCTATGGGA
AATTTTATTT CGGGCCAAAG GTGGAAGGTA AACTATGCCG ATCCGGCTTA CTACAGGGAA
TATACGGGAG ACTCAATAAT AATGCAGTTA CGCTTTAAAA AAATAGACGG TATTTTGCAG
CCTGAGATAG AGGCAGCCCC TGTTTTAATT ACAAACTATA ACGAAAAAGA TGCACCCGTA
ATAAAACGCT TTACCCAAGA ATGGATTGAG ACCCTTCCCG AAAAAGAAAG GGCCTACTAT
CTTAAAAGGC TTGAGCTTAT GAGGGCCTAC TTACCTAAGC TAAAATAA
 
Protein sequence
MNNYYNIFIY CILYNINCQC IIITIMKKNL NYYLFLFITA AVFVLNSCNS TEISESKLPQ 
KENDISELVL SFSGDIMAHD VNFKMKDYNR IYDDVRDILL NDDLTFGNVE TPVCEERPLS
SFPCFNIHKD YLRAAIEGGF DVFSFANNHT NDQGIQGIDG TIKSFNALKE EYKNKELFSS
GLKNKEDEDF KPVLIEKKGW KILFLSVTEL INSHGKSKHR LYYSEPTKTG REKLLLSIKK
MREENPCDIF ILSLHLNEAE YGLKVLDSKK TWFKALAQAG IDVVWANHPH VLQDWELSDV
EILTDDSKKD IIQINKGENN EPLDSFLTHK KNAFFMYSMG NFISGQRWKV NYADPAYYRE
YTGDSIIMQL RFKKIDGILQ PEIEAAPVLI TNYNEKDAPV IKRFTQEWIE TLPEKERAYY
LKRLELMRAY LPKLK