| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1442 |
|---|
| Symbol | hisS |
|---|
| ID | 2741405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1487556 |
|---|
| End bp | 1488902 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637160321 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | NP_972048 |
|---|
| Protein GI | 42526950 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATT TAATACAACC GAAAGTTTTA AAAGGATTTA GAGATTTCCT TCCGGCAGAT
GAGATTGAAA GAGCTCTTCT TATGGAAAGA CTGGTAAAGG TTTTTAGGGA TTACGGCTTT
GTGCCTATAG ACACCCCTGC CTTAGAATAT TCCGAGATTC TATTGAGAAA GAGCGGAGGA
GAGACCGAAA AGCAGGTTTT CCGGTTTAGC GACAATGGCG GACGGGATGT TGCTATGCGT
TTTGACTTAA CCGTTCCCTT AGCTCGATTT GTTGCAGAAC ATAAGTCCGA GATATATTTC
CCGTTTAAGC GTTACCATTT GGGAAAGGTT TGGCGCGGTG AAAAGCCTCA GGCCGGACGG
TATCGGGAAT TTTTGCAATG TGATTTTGAT ACATTGGGTT CCGATTCGGC TGCCGTTGAT
TTTGAAATTT TGCGTCTTAT TAAAAAAGCT TTAAACGAAT TAGGTGTTTC CAATTTTAAA
ATACACGTTT CCCATAGGGG TATATTTAAC CGTTTTTTAA AGTCTTTAAA CCTATCGGAA
GACAGCGAAG AGGTTTTGCG TATTGTAGAT AAACTTGCTA AGATAGGGGA GGACGAGGTT
TTAAAGCTCC TTACCGATAT AAGCTCCGAA GAAAGTGCCA AAAAAATATT GGCTTATATT
TCCGGTGTAA GCAAGGAGTT AAAAAGCGAA GACTTTGAAA AGACTCTTTC CCACTTGGAA
AACCTCGCAG GCGGCCCCGA CGAAGATACA AAACGCATGA GAGATATCTA TGCCTTGGTA
AAGGCTGTAG GTATTGAAGA TTCAATTGTT TTTGATCCTT CAATTACACG AGGTCTGGAT
TATTACACCG GTGTTGTATT TGAGACCTTT TTAAACGATT TACCATCGAT AGGCTCTGTT
TGCTCAGGCG GAAGGTACGA TAACCTTACG GCTCTTTATA TGAAGGAGTG TATTACCGGA
GTGGGTGCTT CCATAGGGCT TGACAGGCTT TTAGCTGCCC TTGAACTCTT GGGCCATCAA
AAAACAAAGG CCAGCTTTAC CGACCTCCTT ATTTTTTCTT TACCTGAAGA TGATCTGGTT
CTTTCGTATA AGATAGTAAA TTTTTTTGAA GCCGAAAAAA TAAATGCTGA AGTATATCCT
GAACCTAAAA AGATGAATCA TCAGTACACC TATGCCGAAA AAAAAGACAT AAGGTGGGGG
CTTTTCTTAG ATAAAGATTC TTGTGTGGAA GAATTCGATA AGGCCCCTCA AAGGTTTAAG
ATAAAATTAA AAGATATGAC TAATAGAACA GAGGATGAAA CGCCTCTTAG CGAGGCCGTA
AAAAAGATAA GAGCTTCAAA AAATTAA
|
|---|
| Protein sequence | MSDLIQPKVL KGFRDFLPAD EIERALLMER LVKVFRDYGF VPIDTPALEY SEILLRKSGG
ETEKQVFRFS DNGGRDVAMR FDLTVPLARF VAEHKSEIYF PFKRYHLGKV WRGEKPQAGR
YREFLQCDFD TLGSDSAAVD FEILRLIKKA LNELGVSNFK IHVSHRGIFN RFLKSLNLSE
DSEEVLRIVD KLAKIGEDEV LKLLTDISSE ESAKKILAYI SGVSKELKSE DFEKTLSHLE
NLAGGPDEDT KRMRDIYALV KAVGIEDSIV FDPSITRGLD YYTGVVFETF LNDLPSIGSV
CSGGRYDNLT ALYMKECITG VGASIGLDRL LAALELLGHQ KTKASFTDLL IFSLPEDDLV
LSYKIVNFFE AEKINAEVYP EPKKMNHQYT YAEKKDIRWG LFLDKDSCVE EFDKAPQRFK
IKLKDMTNRT EDETPLSEAV KKIRASKN
|
|---|
| |