Gene TDE1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1439 
Symbol 
ID2741402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1484456 
End bp1485445 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content34% 
IMG OID637160318 
Productepimerase/dehydratase, putative 
Protein accessionNP_972045 
Protein GI42526947 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATAG CAATAATAGG CGGTTCCGGT TTTATAGGAA CAAGACTAAC AAAGAGACTT 
TTAGCGTCCG GACATACAAT TAAAATTCTT GATAAACAGG ATAGTAAATA CTATCCCAAC 
TTGAGAGCCT TTGCTGATGT AAGGGATATA GATTCTTTAA AAAAAGAATT ATCCTCTAGC 
CTTGACTGCG TTATCAACTT GGCGGCTGAA CATCGCGATG ATGTTGAACC TAAAAGCTTA 
TATGATGAAG TAAATGTTGA CGGTGCAGAA AATGTATGCA AGGTCTGTTC GGAATTGGGA 
ATAAAAAAAA TTATTTTTAC AAGCTCTGTT GCGGTATACG GTTTTGCACC TTTAAATACG 
AACGAAACAG GTAAAATAAA TTATTTTAAT GATTATGGCA GAACAAAATG GCTTGCTGAA 
GGAAAATACC GTGCGTGGAT TGAAAACGAT AACGAAAATT CGCTTACGAT AATAAGACCT 
ACTGTTGTAT TCGGAGAGCA AAATAGGGGC AATGTTTATA ATCTATTAAG ACAAATCAGT 
TCAGGCTTTT TCCCATTTGT CGGAAACGGT AAAAATAAAA AATCAATGGC CTATGTTGAA 
AATGTAGCTG CCTTTATCGA ATTTTCTTTA AATAACGGAC AAGGTGAACA CTTATTTAAT 
TATCTAGATA AACCCGACTT TGATATGAAT TCTCTTGCCA ATGAAGTTTA TAAAATCTTA 
GGAAATAAGA ATCATAAAAT TTTTCATTGG CCCTATTGGC TGGGCTATTG CGGCGGTCTT 
TGCTTTGACT TACTTGCTAA AATATCGAGA AAAAAATTAG CAATCAGTTC AATCAGGGTA 
AAAAAATTCT GTGCCGATAC TCTTTTTGAT ACGATCAATA TACCTAAAAC CGATTTTAAG 
GCTCCCGTAT CTTTAAGCGA GGGCTTATAC AATACTATAA AATATGAATT CATTGATAAG 
ATTCAAGATC ATGTTTTTCA TACTGAGTAG
 
Protein sequence
MHIAIIGGSG FIGTRLTKRL LASGHTIKIL DKQDSKYYPN LRAFADVRDI DSLKKELSSS 
LDCVINLAAE HRDDVEPKSL YDEVNVDGAE NVCKVCSELG IKKIIFTSSV AVYGFAPLNT 
NETGKINYFN DYGRTKWLAE GKYRAWIEND NENSLTIIRP TVVFGEQNRG NVYNLLRQIS 
SGFFPFVGNG KNKKSMAYVE NVAAFIEFSL NNGQGEHLFN YLDKPDFDMN SLANEVYKIL 
GNKNHKIFHW PYWLGYCGGL CFDLLAKISR KKLAISSIRV KKFCADTLFD TINIPKTDFK 
APVSLSEGLY NTIKYEFIDK IQDHVFHTE